Transcript Information: R_Transcript_94307.p1


Annotated TAIR IDAT5G48150.1
Annotated Gene NameGRAS family transcription factor
Annotated Gene Symbol(s)PAT1
Annotation TypeOrtholog
Chromosome Positionchr5:19522497-19524053 | Reverse length=490
E-Value2.4E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2740207869324
Replicate 23.3638439047238
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 15.0437433077952
Replicate 26.1807367061024
Replicate 37.7336087502353
Condition 3: 24 Hour
Replicate 15.1735903611728
Replicate 23.1063744916306
Replicate 34.8939058014718


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94307.p1 GENE.R_Transcript_94307~~R_Transcript_94307.p1 ORF type:complete len:568 (+),score=109.91,GRAS|PF03514.10|1.1e-127 R_Transcript_94307:338-2041(+)
ATGGACTCACACCAGATATTTGGATCATTGAAGTTTAACTTTAGAGCTTCTCCCATCTCGCCCTTCTCGACTCACTTTGATTGTGATACAGCCGCTACATTGAGTGACAGCCAAGAGCGTAACAGCTCAACGGAGAGTGTATCCACAAAAAGCACATCTTGTAATTCCCCCCTTGAGGCAAGTAGTTACTATCATCATCTAAACTCGAGCCCTCCAGGAGATTCTCCCGAAGAAACTGTTCTACTGTCTACTAGCGGGAGTTGGTTTAGACAAACTGCAGACTATGGAATCAAGAACATGAAACATGCGTTGCAGGAGCTGGAGACCGCTCTAATGGGAACAGGTGTTGAGGAAAACCAACCAACTGCTGCTAATGCGTCTATGGGGGATACCCGGCAGCCTCAAATTCCGAGTCAGAGATCGAGATCCTGGAATCGTGACCAACAGAGTTCACATTGTGATACAGTCCAGTCATCATCTGCAATGGTGGGGGGACGACGATCAGGGAAGGAAGGTCAGAGTGAGAAACGTCACAAGGGTATGGAACAACAGAAACAATCAGTGCAACTCAGCTTGCCACCTGGCAATTTGAAACAGCTGTTGATTGAATGTGCAAGGGCCTTATCTGAGAACCGAGTAGATGATTTTGAGAAGTTGGTTGAAAAGGTGAGGGGGGAGGTCTCAATCTCTGGAGAGCCAATCCAGCGTCTTGGTGCTTACATGCTCGAAGGTTTAGTCGCAAGGAAGGAGTCTTCAGGAGCCAACATCTACAAGGCTCTCAGGTGTAAAGAGCCTCTCGGCAAGGACCTACTCTCATTCATGCACATCCTTTATGAAATATGCCCGTACTTGAAGTTTGGTTACATGGCTGCGAATGGAGCAATTGCTGAAGCCTGCAGAAATGAGGACAGGATACATATCATCGATTTCCAGATTGCACAGGGGACTCAGTGGTTGACGCTGCTGCAAGCACTAGCTGCAAGGCCGAATGGACCTCCGACTGTGAGGATCACAGGCATTGACGATCCTGTTTCAAAGTATGCTCGGGGAGCAAGCTTGGATGCTGTTGGGGAGAGGCTGGCAGCTCTCTCTGAGAAACACAAAATACCAGTCGAGTTCAATGCAGTGCCTGTGTTTGGACCTGATGTTACGCGAGAAATGCTTGATATTCGACCAGGGGAAGCTCTAGCTGTGAACTTCCCTTTGCAGCTCCACCATACCCCTGACGAGAGTGTTGATGTGAACAATCCAAGGGACGAGCTTCTCAGGATGGTGAAATCACTAGTTCCTAAGGTGATCACATTGGTTGAGCAAGAGTCCAACACCAACACCACCCCTTTCTTGACGAGGTTCATAGAAACACTCGAGTACTACTCAGCTATGTTCGAATCGATAGACGTTAAAATGCCTAGGGATCGGAAGGAGAGGATCAATGTGGAGCAGCACTGCTTGGCTAAGGACATTGTGAACATCATTGCTTGTGAGGGTAAGGACAGGGTCGAGAGGCATGAACTCTTCGGAAAGTGGAAATCAAGGTTGACTATGGCAGGGTTTCAGCAGTATCCATTGAGCTCGTATGTCAACTCTGTTATACGAGGCCTGCTTAGGTGTTACTCGGAGCACTACACCTTGGTGGAGAAGGATGGCGCGATGCTTCTGGGTTGGAAGGACCGAATGTTGATTTCAGCTTCAGCATGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94307.p1 GENE.R_Transcript_94307~~R_Transcript_94307.p1 ORF type:complete len:568 (+),score=109.91,GRAS|PF03514.10|1.1e-127 R_Transcript_94307:338-2041(+)
MDSHQIFGSLKFNFRASPISPFSTHFDCDTAATLSDSQERNSSTESVSTKSTSCNSPLEASSYYHHLNSSPPGDSPEETVLLSTSGSWFRQTADYGIKNMKHALQELETALMGTGVEENQPTAANASMGDTRQPQIPSQRSRSWNRDQQSSHCDTVQSSSAMVGGRRSGKEGQSEKRHKGMEQQKQSVQLSLPPGNLKQLLIECARALSENRVDDFEKLVEKVRGEVSISGEPIQRLGAYMLEGLVARKESSGANIYKALRCKEPLGKDLLSFMHILYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWLTLLQALAARPNGPPTVRITGIDDPVSKYARGASLDAVGERLAALSEKHKIPVEFNAVPVFGPDVTREMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLVPKVITLVEQESNTNTTPFLTRFIETLEYYSAMFESIDVKMPRDRKERINVEQHCLAKDIVNIIACEGKDRVERHELFGKWKSRLTMAGFQQYPLSSYVNSVIRGLLRCYSEHYTLVEKDGAMLLGWKDRMLISASAWH*

Click here to download the sequence:
Link to NCBI Protein BLAST