Transcript Information: R_Transcript_94313.p1


Annotated TAIR IDAT5G47960.1
Annotated Gene NameRAB GTPase Homolog A4C
Annotated Gene Symbol(s)SMG1, ATRABA4C, RABA4C
Annotation TypeOrtholog
Chromosome Positionchr5:19421533-19422473 | Reverse length=223
E-Value7.6E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.892899649627
Replicate 245.777341680169
Replicate 341.78267587281
Condition 2: 8 Hour
Replicate 124.065506750726
Replicate 231.573949037554
Replicate 334.121911809998
Condition 3: 24 Hour
Replicate 136.062478306179
Replicate 245.151753179422
Replicate 337.199704103053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94313.p1 GENE.R_Transcript_94313~~R_Transcript_94313.p1 ORF type:complete len:233 (+),score=48.22,Ras|PF00071.18|8.9e-61,Roc|PF08477.9|5e-34,Arf|PF00025.17|6.3e-14,MMR_HSR1|PF01926.19|1e-05 R_Transcript_94313:791-1489(+)
ATGTCGACAATGAATGGTTATGGAGGAGTAGGAGGCGGGGCACTAAATCAAAAGATAGATTATGTGTTCAAAGTGGTTCTGATAGGGGATTCAGCTGTAGGCAAATCCCAGCTGCTGGCCCGCTTTGCTCGTAATGAGTTTAGCATCGATTCTAAGGCTACCATAGGCGTTGAGTTCCAGACCCGTACCCTTTCCCTTGATCACAAGACTATCAAGGCCCAGATTTGGGATACTGCTGGCCAGGAGAGGTATCGGGCAGTGACAAGTGCATATTATCGTGGTGCAGTTGGGGCAATGCTGGTGTATGACATAACCAAACGCCAGACATTTGATCACATGTCAAGATGGTTGAAGGAGTTGCGGGATCATGCTGATAAAAATATTGTCATCATGCTCGTAGGAAACAAATCTGATCTGGGCACGCTTAGGGCTGTCGCCACTGAGGATGCCAAAGAGTTTGCAGAGAAAGAAGGCCTCTTTTTCATGGAAACATCAGCTCTCGAATCTGTTAATGTTGAGACCGCTTTTATTACAGTCCTTACAGAGATCTATAGGATTGTCAGTAGGAAGACCCTTGTTGCTAATGAAGAAGCAGATGGTGGAGGAAGTTCAGCCCTTCTTACTGGAAAGCAAGTCGCCCTTCCAGGACAGGAACAGGCATCTACAGGGGGGAAGTTGAGTTGTTGCATGTATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94313.p1 GENE.R_Transcript_94313~~R_Transcript_94313.p1 ORF type:complete len:233 (+),score=48.22,Ras|PF00071.18|8.9e-61,Roc|PF08477.9|5e-34,Arf|PF00025.17|6.3e-14,MMR_HSR1|PF01926.19|1e-05 R_Transcript_94313:791-1489(+)
MSTMNGYGGVGGGALNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSIDSKATIGVEFQTRTLSLDHKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHMSRWLKELRDHADKNIVIMLVGNKSDLGTLRAVATEDAKEFAEKEGLFFMETSALESVNVETAFITVLTEIYRIVSRKTLVANEEADGGGSSALLTGKQVALPGQEQASTGGKLSCCMYS*

Click here to download the sequence:
Link to NCBI Protein BLAST