Transcript Information: R_Transcript_94386.p1


Annotated TAIR IDAT3G10230.1
Annotated Gene Namelycopene cyclase
Annotated Gene Symbol(s)LYC
Annotation TypeOrtholog
Chromosome Positionchr3:3164340-3165845 | Reverse length=501
E-Value6.3E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.954331321577
Replicate 28.5064062951405
Replicate 312.992556699794
Condition 2: 8 Hour
Replicate 112.484887660848
Replicate 213.743545953772
Replicate 316.931937179491
Condition 3: 24 Hour
Replicate 113.883575121892
Replicate 29.7200054003928
Replicate 313.625745012594


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94386.p1 GENE.R_Transcript_94386~~R_Transcript_94386.p1 ORF type:complete len:506 (+),score=109.87,Lycopene_cycl|PF05834.8|1.4e-142,Pyr_redox_2|PF07992.10|0.0024,Pyr_redox_2|PF07992.10|0.16,Pyr_redox_2|PF07992.10|1.7e+03 R_Transcript_94386:389-1906(+)
ATGGGAACTTTGCTTAGGCTTCATAACAAGATTGAATTTTGGAGTCCTTTTTTTGGGTTTGCTGACAAAAAGGCTCATTTGAGATATCATAAAGGTCAACAGCATTATATTGGGTATGATTCTGGATTTACCAATAAGAAAAATGGGCCTAAAAAAGGGTGTGTTAAGGCAAGAAGTAGTGCTCTTTTGGAGCTTGTTCCAGAAACTAAGAAGGAAAACCTTGATTTTGAGTTACCATTGTATGACCCTTCAAAGGGCAAGGTGGTGGACCTTGTTGTTGTTGGGGGTGGCCCAGCTGGGCTTGCTGTTGCTCAGCAAGTTTCTGAGGCTGGCCTCACTGTTTGCTCAATCGATCCTTCCCCAAAATTGATTTGGCCTAACAATTATGGTGTTTGGGTGGATGAATTTGAGGCCATGGATTTGCTTGATTGCCTTGACACTACTTGGTCTGGGGCTGTTGTTTATATCGATGATCATTCGAAGAAGGATTTGAACAGGCCATATGGGAGGGTTAATAGGAAGCAATTGAAGTCGAAGATGATGCAAAAATGTATCTCCAATGGGGTGAAATTCCATCAAGCAAAAGTTATTAATGTCATTCATGAGGAGTCTAAATCTCTTGTGACGTGCAATGATGGAGTTACCATTCACGCTTCTGTTGCGTTGGATGCAACTGGCTTCTCTAGATGCCTTGTGCAGTATGATAAGCCATATAACCCTGGTTATCAAATTGCTTATGGCATTTTAGCTGAAGTTGAGAGTCACCCTTTTGATGTGGATAAGATGTTGTTTATGGATTGGAGAGATTCCCATTTGGATGATAATGTGGAACTAAAAGAGAGAAATAGCAAGATCCCGACTTTTCTATATGCTATGCCTTTCTCTTCTAACAGAATATTCCTTGAGGAAACTTCGTTGGTTGCTCGGCCTGGAGTACCTATGGAGGAGATTCAGGAAAGGATGGTTGCTCGATTGAAGCACCTTGGTATAAGAGTGATCAGCATTGAAGAAGATGAACGGTGTGTGATCCCTATGGGGGGTCCCCTTCCTGTAATCCCGCAAAGAGTTGTGGGGATTGGCGGGACAGCTGGGATGGTTCATCCTTCTACTGGGTATATGGTGGCACGAACTTTGGCAGCAGCTCCAATTGTGGCCAATTCTATTGTTCAGTACCTTGGATCAGAAAGCAATTGCTTTGGAAGCGAGTTGTCTGCACAAGTATGGAAGGATTTGTGGCCGATTCAGAGGAGGCGACAGAGAGAATTTTTCTGCTTTGGTATGGATATTCTGCTCAAACTCGAGTTAGAGGGTACAAGAAAGTTTTTCGATGCATTTTTTGACCTAGAACCTCGTTATTGGCATGGGTTCTTGTCTTCTCGGCTTTTTCTTCCGGAGCTTATAGTTTTCGGACTCTCTCTTTTTGGTCATGCCTCTAACTCTTCTAGGTTAGAAATTATGTCAAAAGGCACCCTTCCCCTAATAAATATGATCGGCAACTTAGTTAAGGATAAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94386.p1 GENE.R_Transcript_94386~~R_Transcript_94386.p1 ORF type:complete len:506 (+),score=109.87,Lycopene_cycl|PF05834.8|1.4e-142,Pyr_redox_2|PF07992.10|0.0024,Pyr_redox_2|PF07992.10|0.16,Pyr_redox_2|PF07992.10|1.7e+03 R_Transcript_94386:389-1906(+)
MGTLLRLHNKIEFWSPFFGFADKKAHLRYHKGQQHYIGYDSGFTNKKNGPKKGCVKARSSALLELVPETKKENLDFELPLYDPSKGKVVDLVVVGGGPAGLAVAQQVSEAGLTVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDHSKKDLNRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVINVIHEESKSLVTCNDGVTIHASVALDATGFSRCLVQYDKPYNPGYQIAYGILAEVESHPFDVDKMLFMDWRDSHLDDNVELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMEEIQERMVARLKHLGIRVISIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSESNCFGSELSAQVWKDLWPIQRRRQREFFCFGMDILLKLELEGTRKFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFGHASNSSRLEIMSKGTLPLINMIGNLVKDKD*

Click here to download the sequence:
Link to NCBI Protein BLAST