Transcript Information: R_Transcript_94397.p1


Annotated TAIR IDAT5G58240.1
Annotated Gene NameFRAGILE HISTIDINE TRIAD
Annotated Gene Symbol(s)FHIT
Annotation TypeOrtholog
Chromosome Positionchr5:23558349-23559313 | Reverse length=180
E-Value7.1E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9725576583829
Replicate 25.3094093006731
Replicate 36.3191000265248
Condition 2: 8 Hour
Replicate 16.0511045559284
Replicate 25.2689434223483
Replicate 36.0505368734623
Condition 3: 24 Hour
Replicate 17.1248367258392
Replicate 26.337718072005
Replicate 37.6732757810387


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94397.p1 GENE.R_Transcript_94397~~R_Transcript_94397.p1 ORF type:3prime_partial len:174 (+),score=27.15,HIT|PF01230.19|8e+03,HIT|PF01230.19|1e-25 R_Transcript_94397:259-777(+)
ATGCTTTTAAGGCAATTGGAGAACAAGGTGTTTATGCAGACTTTGACTCCCATAACCAGGAGTTCTGATGCCCAGAGCAATCCCTCCTTTACTACCAGACTCTTTTCACCATCAAGAAGGCTCCAAGCTTTCTCTACTACATTTACTAGATCTTACAGAATGAGTTCAGAGGCTTTTACGTTTGGGCCATACAAAATAGATACAAAGGAAGTGTTTTACACTACAAGTCTCTCATACGCCTTTGTGAACTTGCGGCCTGTTGTACCTGGTCATGTACTTGTGTGCCCAAGGCGTGAAGTGAAGCGCTTTATTGATCTGACTGCCGATGAGACTTGTGATTTATGGCTCACAGCACAAAAAATTGGTAGTCAACTTGAGCACTACCATAAAGCATCATCATTGACCCTTACAATTCAAGATGGCCCCCAGGCAGGACAGACAGTGCCTCATGTCCATATCCATATTCTTCCGAGGAAGGGTGGTGACTTTGAGAAGAATGATGAGATATATGATGCGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94397.p1 GENE.R_Transcript_94397~~R_Transcript_94397.p1 ORF type:3prime_partial len:174 (+),score=27.15,HIT|PF01230.19|8e+03,HIT|PF01230.19|1e-25 R_Transcript_94397:259-777(+)
MLLRQLENKVFMQTLTPITRSSDAQSNPSFTTRLFSPSRRLQAFSTTFTRSYRMSSEAFTFGPYKIDTKEVFYTTSLSYAFVNLRPVVPGHVLVCPRREVKRFIDLTADETCDLWLTAQKIGSQLEHYHKASSLTLTIQDGPQAGQTVPHVHIHILPRKGGDFEKNDEIYDAV

Click here to download the sequence:
Link to NCBI Protein BLAST