Transcript Information: R_Transcript_94470.p1


Annotated TAIR IDAT1G07590.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2336649-2338481 | Reverse length=534
E-Value5.9E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.565894885327
Replicate 27.0641758409975
Replicate 38.0066540756645
Condition 2: 8 Hour
Replicate 15.5836925674092
Replicate 26.9381427768912
Replicate 37.294572492305
Condition 3: 24 Hour
Replicate 17.6812102687085
Replicate 26.3073917948754
Replicate 38.1004963140293


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94470.p1 GENE.R_Transcript_94470~~R_Transcript_94470.p1 ORF type:complete len:535 (+),score=92.11,PPR_2|PF13041.2|61,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|7.5,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|7.1e+02,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|0.17,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|14,PPR|PF01535.16|4.3,PPR|PF01535.16|8.8e+03,PPR|PF01535.16|19,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|5.8,PPR|PF01535.16|0.024,PPR|PF01535.16|4.4,PPR_1|PF12854.3|52,PPR_1|PF12854.3|51,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0091,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|88,PPR_1|PF12854.3|7.1e+03 R_Transcript_94470:307-1911(+)
ATGCCTTTGATATGCTGCACAAAACCCACAGTTTCCCTTGTCATTGGGCGTAGACTCACTGCGGCATTTCATCGAGCACTTGGTGTACATCTTCAAGCAAGCAACAAAACCAAGCATTTTGCTGCATTTTGCACTCAAATAATCAGTGATAGATTGGTTTCAGAAAATTCGAATTCTGAGATTGTAGAAGCACCCGTAATGCTGTCTACGAGGATAGAGAGATTACCAAGAGGAGAGGCAGTTGGTAGTGTATTTCAGAGATGGATGGGTGAGGGTTTTCCTGTTCATAGGGGCGATATTTTCCATGCTATCAACCGTTTAAGAAAGCTCAAGCTCAATAAACGTGCTCTTGAGGTAATGGAATGGGTGATCAGGGAGAAACCATATCGGCCAAAGGAGCTGGATTATTCTTACTTGCTGGAGTTTACCATTAAACTTCATGGTATATCACATGGTGAGAAACTGTTCTCTAATGTTCCTGCTGAATTCCAGAATGACTTATTATACAACAATCTTGTGATTGCATGCTTGGATAAAGGAGTGATCAGACTTTCATTGGATTACATGAAGAAAATGAGGGAATTGGGGCATCCTATTTCGTATCTTGTCTTCAACAGTTTGATTATTCTGCATTCCTCTCCTGGGCGTAGGAAAATGATTCCCAAGATACTCGCTCAGATGAAGGCCGATAAAGTTGCTCCACATGTTTCTACTTTCAACATCCTCTTGAAGATAGAAGCCAATGACCACAATATTGATGGACTGATGAAAGTTTTCAGTAACATGAAACAGGCAAATGTTGATCCCAATGAGATTACATACTGCATTCTAGCAACTGCACATGCAGTTGCAAGGTTGTATGCTGTGTGCGAGACGTATGTTGAGGCTGTGGAGAAGTCAAGAACAGGGAATAATTGGTCAACATTTGATGTCCTTATCATTTTGTATGGGTATTTGGGAAAGGCAAAGGAGCTAGAGAGAACTTGGGGCATTGTGCGAGAATTCCCTCATATTAGGACAAAGAGTTTCTTGATGACAATAGAAGCATTTGGTAGAATTGGACTACTGAATCGTGCTGAAGAACTTTGGGAAGAAGTGAAGTCTAGGAAGGGTTTGAAATCAACAGAACAGTATAATTCCATAATCTCTGTCTATTCCAAGCACGGTCTGATTGAAAAGATTTCAGGGCTCTTTAGGGAGATGAAAATGAATGGATGCAAGCCGAATGCGATAACCTATAGGCATCTTGCTTTGGGATGCTTAAAAGCTGGATTAGTAAAGGAAGCATTAAGGACATTAGAAATGGGGTCGAAGCAAACCTCAAGCAGTAGTATTAAACGGTCAAACCCCTGGCTAGAGACTACCCTGTCAATTGTCGAGATATTTGCAGAGAATGGGGATGTAGAGAATGCAGAGAAACTGTTTGATGAGCTGAAGGAAGCCAACTATACCAGGTATACATTTGTGTACAATGCATTGATCAAAGCCTATGTTAGGGCCAAGATTTATTGTCCAAATCTTTTGCGAAGGATGATTCTTGGAGGAAGTAGACCAGATTCTGAAACCTATAGTTTGGTAAAGCTAGTTGAGCAGTTTAGAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94470.p1 GENE.R_Transcript_94470~~R_Transcript_94470.p1 ORF type:complete len:535 (+),score=92.11,PPR_2|PF13041.2|61,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|7.5,PPR_2|PF13041.2|3.9e-10,PPR_2|PF13041.2|7.1e+02,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|0.17,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|8.9,PPR_3|PF13812.2|0.087,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|14,PPR|PF01535.16|4.3,PPR|PF01535.16|8.8e+03,PPR|PF01535.16|19,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.1,PPR|PF01535.16|4.5e-07,PPR|PF01535.16|5.8,PPR|PF01535.16|0.024,PPR|PF01535.16|4.4,PPR_1|PF12854.3|52,PPR_1|PF12854.3|51,PPR_1|PF12854.3|13,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|0.0091,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|88,PPR_1|PF12854.3|7.1e+03 R_Transcript_94470:307-1911(+)
MPLICCTKPTVSLVIGRRLTAAFHRALGVHLQASNKTKHFAAFCTQIISDRLVSENSNSEIVEAPVMLSTRIERLPRGEAVGSVFQRWMGEGFPVHRGDIFHAINRLRKLKLNKRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGEKLFSNVPAEFQNDLLYNNLVIACLDKGVIRLSLDYMKKMRELGHPISYLVFNSLIILHSSPGRRKMIPKILAQMKADKVAPHVSTFNILLKIEANDHNIDGLMKVFSNMKQANVDPNEITYCILATAHAVARLYAVCETYVEAVEKSRTGNNWSTFDVLIILYGYLGKAKELERTWGIVREFPHIRTKSFLMTIEAFGRIGLLNRAEELWEEVKSRKGLKSTEQYNSIISVYSKHGLIEKISGLFREMKMNGCKPNAITYRHLALGCLKAGLVKEALRTLEMGSKQTSSSSIKRSNPWLETTLSIVEIFAENGDVENAEKLFDELKEANYTRYTFVYNALIKAYVRAKIYCPNLLRRMILGGSRPDSETYSLVKLVEQFRT*

Click here to download the sequence:
Link to NCBI Protein BLAST