Transcript Information: R_Transcript_94501.p1


Annotated TAIR IDAT5G20890.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7087020-7089906 | Reverse length=527
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1149.50208208384
Replicate 2142.85407415315
Replicate 3146.77600165384
Condition 2: 8 Hour
Replicate 1122.29072550068
Replicate 2138.51089638606
Replicate 3150.14464332033
Condition 3: 24 Hour
Replicate 1180.54366136806
Replicate 2179.64632571815
Replicate 3182.86557802563


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94501.p1 GENE.R_Transcript_94501~~R_Transcript_94501.p1 ORF type:5prime_partial len:530 (+),score=159.47,Cpn60_TCP1|PF00118.20|9.6e-149 R_Transcript_94501:3-1592(+)
TTCATTATGGCGGTTGATAAAATTTTGAAAGAAGATGCATCTGAGGAGAAGGGTGAGCGTGCCAGAATGTCAACATTCGTTGGTGCCATTGCAATTACTGACTTGATCAAGACAACTTTGGGTCCAAAGGGAATGGACAAGATTCTGCAGTCAACTGGTCGGGGTCACAATGTCACTGTGACAAATGATGGTGCTACAATCATGAAGTCTCTTCATATTGATAATCCAGCTGCCAAAGTTCTTATTGAAATTTCGAAGACCCAAGATGATGAAGTTGGTGATGGGACTACATCGGTAGTTGTATTGGCTGGAGAGCTGTTAAGAGAGGCTGAGAAACTGTTAGCAATGAAGATTCACCCCATGACTGTAATTTCAGGTTATAGGATGGCTGCTGATTGTGCTCATAATGCATTGTTGAAAAAGGTTGTCGACAATGGCCAAGATGCTGAGAAATTCAGGTCAGACTTGATGAACATTGCTATGACTACATTGAGTTCAAAAATATTGTCCCAAGACAAGGAACACTTTGCCAATATGGCAGTAGATGCAGTTATGAGATTGAAGGGCAGCACAAACTTGGAGGCCATTCAAATTATCAAAAAGCCTGGAGGTTCACTGAGGGATTCATTTCTAGATGAAGGGTTTATTTTGGACAAAAAGATTGGTGTTGGCCAACCAAAACGCATAGAAAATGCAAAAATTTTGGTGGCAAACACAGCCATGGACACAGACAAGGTGAAGATCTATGGGGCACGCGTACGGGTTGATTCAATGTCTAAGGTTGCGGAGATTGAGGGGGCAGAAAAGGAGAAGATGAGAGAGAAAGTGAAGAAGATTATAGGTCATGGAATTAACTGTTTTGTCAATCGGCAGTTGATCTACAATTTCCCTGAGGAACTCTTTGCAGATGCTGGAGTCCTGGCCATTGAGCATGCTGACTTTGATGGTATTGAGCGACTTGCCCTGGTGACTGGTGGTGAGATTGCATCTACATTTGATAATCCTGAATCTGTTAAGCTTGGTCATTGCAAGCTGATTGAGGAAATTATGATTGGAGAAGATAAGTTGATTCATTTCTCTGGTGTGGAAATGGGACAAGCATGCACAATTGTATTGAGAGGTGCCAGTGAGCATGTGCTTGATGAGGCTGAAAGGTCTTTGCATGATGCACTGTGTGTGCTGTCACAGACAGTCAATGACAGCAGGGTTGTGCTTGGTGGCGGGTGGCCTGAAATGGTGATGGCAAAGGAGGTAGATGAATTGGCCAGAAAGACTCCTGGTAAGAAGTCTCACGCCATTGAGGCTTTCTCAAGGGCACTTCAGGCCATACCTACAATAATCGCAGACAACGCTGGGCTGGACAGTGCTGAATTAATCTCAAAGCTTCGCGCAGAGCACCAGAAGGAAGGCTGCAATTCTGGAATCGATGTGATCACTGGAGCTGTTGGGGATATGAAAGAATTAGGGATTTGTGAGGCATTCAAAGTGAAGCAGGCCGTGTTGTTGTCTGCCATAGAGGCAGCTGAGGGGCTTCTCAGGGTTGATGACATCATCACCTGTGCACCAAGGAGAAGAGAGGACAGAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94501.p1 GENE.R_Transcript_94501~~R_Transcript_94501.p1 ORF type:5prime_partial len:530 (+),score=159.47,Cpn60_TCP1|PF00118.20|9.6e-149 R_Transcript_94501:3-1592(+)
FIMAVDKILKEDASEEKGERARMSTFVGAIAITDLIKTTLGPKGMDKILQSTGRGHNVTVTNDGATIMKSLHIDNPAAKVLIEISKTQDDEVGDGTTSVVVLAGELLREAEKLLAMKIHPMTVISGYRMAADCAHNALLKKVVDNGQDAEKFRSDLMNIAMTTLSSKILSQDKEHFANMAVDAVMRLKGSTNLEAIQIIKKPGGSLRDSFLDEGFILDKKIGVGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKVAEIEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGVLAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVNDSRVVLGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALQAIPTIIADNAGLDSAELISKLRAEHQKEGCNSGIDVITGAVGDMKELGICEAFKVKQAVLLSAIEAAEGLLRVDDIITCAPRRREDRM*

Click here to download the sequence:
Link to NCBI Protein BLAST