Transcript Information: R_Transcript_94510.p1


Annotated TAIR IDAT5G13760.1
Annotated Gene NamePlasma-membrane choline transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4442102-4444565 | Forward length=569
E-Value5.5E-249
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.242531703083
Replicate 26.6890868582896
Replicate 39.4059524288626
Condition 2: 8 Hour
Replicate 16.6740233661518
Replicate 26.846783289425
Replicate 38.1280663485981
Condition 3: 24 Hour
Replicate 17.9234909900926
Replicate 25.5430916149769
Replicate 38.0965137691355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94510.p1 GENE.R_Transcript_94510~~R_Transcript_94510.p1 ORF type:complete len:565 (+),score=106.19,Choline_transpo|PF04515.8|7e+02,Choline_transpo|PF04515.8|2.9e-47 R_Transcript_94510:162-1856(+)
ATGGGCGCTTCTCAACCTCCTGTGGAGGAGAGAGAAAATGGAGAGAAGGTGGTGGAAGCAGGGATGAACCATGCATCTATGCTGAGAAATTTGAATCCCACAAACCCATTAAGGATTGTGATTAATGGTGGTGCTAATCCAAATGCTCATGTTAATCATCCTGCTAATTACTATGGCGGCTCCAGAGATAGACAAAGAGCATTTCCTAATCCTATACCAGCAGCTACAGCAACTGTAACAATGGCGACTCCTCCACCTCCTGTTCATCCACCTCATCATCGTCATGATCGTCATCAACATCCTCCTCCTCCTGTTGCTCAGCCTCAGCCTCAGCCTCCGCCTCAATTCACCCCTACCCCTATTCAAGTCCAGCCGCCATCATTGGCTACATTGAATTCAAGAGGGTACACAAACAAAATATCTCTGTTTGTGTTTGTGCTACACATGATAGCAGCAATAGGGTTGGTTGGTTTTCTATTATACAAAGGAATTGAAGGGTTTGTTGGGGGAGGGAGGTTTAAGAGAAAGGAGCAAGATATGTTGAAGCATTATGTGCCCCAAGTTGAGGCTGCTTCTTTATTGAGTATCATTTTGGCCTTTTTATGGCAGAAAGCTGTTAGGGTTTGGCCTACATTTATGGTTCATTTCATATTATGGAGCAGTTTTGTAATGTCCTTAGCAGCTGGGATTCTCCTAATTTGCTTCCAAAGGCCTACCACTGATGGTTGTGGAGTGGCCTTAATCGCTTTCGCTATTGGGAATGGTTTATACTCTTGTTGGGTCACACAAAGAACAAAGTTTTGTACCAAGATTTTGATGAAATCTCTAGAACCAGTTGCTAAGTTCCCTGATTTGAATCATCCTTCTTACTATATGCTCGGGGCAGGATTCTTGTGGATGTCATTGTGGATTATGGCTGTCATTGGAGCTTTGAATTTCTATTTTCCGCCTTTGGTTATAATCGCGCTTGTGTTGAGCTTGGCTTGGACTACTGAGGTTATGAGGAATGTGGCTAATTTAACTGTGAGCAGAGTCATTGCTCTGTATTATCTCAGGGGAATGCAATCCAGCACTAAATTCTGCTTCCAAAGGGCCCTTACTCGGAACCTTGGTAGCGCTTGCCTTGGTTCACTCTTTGTTCCTGCCATCGAAGCCTTGAGGATTCTTGCTCGAGGTTTGAATTTGCTCGAGGGAGAAGACGAGTTCATGTTCTCTTGTGCTCATTGTTGCTTGCGGGTTATGGAATCTATCTTCAGATATGGCAATGGATGGGCCTATGTTCAGATTGCTGCATATGGGAAAAATTTTGTGAAGGCATCTCAGGACACTTGGGAACTCTTTCAGAAGCAAGAAATGGAGATAATCGTCGACTCAGACATAACCAGTGCCGTGTGCTTCCTCTCCGGGGTATGCAGTGGCTCGATTTGTGTGATTTTGGTGGCGGCGTGGACTCATACCGTCCACCCAGGCTTCACTGCCACCACCTCTATGATTGCCTTCTTTGTTGGTTACCTCATGACCAGGATTGCAATGGCATTGCCTCATGCTTGTGTGAGCTGTTATTACGTCTGCTATGCGGAGAATCCACAGAACAGGCTGTTTGATTCTACGATTCCTGATCGATTGAACCTGATGAAATCTGGTCGCGATGTTGTTGTTCCTACTCCTAGAGTTCCTCGTCGATTCACAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94510.p1 GENE.R_Transcript_94510~~R_Transcript_94510.p1 ORF type:complete len:565 (+),score=106.19,Choline_transpo|PF04515.8|7e+02,Choline_transpo|PF04515.8|2.9e-47 R_Transcript_94510:162-1856(+)
MGASQPPVEERENGEKVVEAGMNHASMLRNLNPTNPLRIVINGGANPNAHVNHPANYYGGSRDRQRAFPNPIPAATATVTMATPPPPVHPPHHRHDRHQHPPPPVAQPQPQPPPQFTPTPIQVQPPSLATLNSRGYTNKISLFVFVLHMIAAIGLVGFLLYKGIEGFVGGGRFKRKEQDMLKHYVPQVEAASLLSIILAFLWQKAVRVWPTFMVHFILWSSFVMSLAAGILLICFQRPTTDGCGVALIAFAIGNGLYSCWVTQRTKFCTKILMKSLEPVAKFPDLNHPSYYMLGAGFLWMSLWIMAVIGALNFYFPPLVIIALVLSLAWTTEVMRNVANLTVSRVIALYYLRGMQSSTKFCFQRALTRNLGSACLGSLFVPAIEALRILARGLNLLEGEDEFMFSCAHCCLRVMESIFRYGNGWAYVQIAAYGKNFVKASQDTWELFQKQEMEIIVDSDITSAVCFLSGVCSGSICVILVAAWTHTVHPGFTATTSMIAFFVGYLMTRIAMALPHACVSCYYVCYAENPQNRLFDSTIPDRLNLMKSGRDVVVPTPRVPRRFTG*

Click here to download the sequence:
Link to NCBI Protein BLAST