Transcript Information: R_Transcript_94534.p1


Annotated TAIR IDAT1G66345.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:24737719-24739353 | Forward length=544
E-Value1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7112150895049
Replicate 21.3122687760186
Replicate 31.5112083830795
Condition 2: 8 Hour
Replicate 11.7854276524033
Replicate 21.9410487709363
Replicate 32.710136307905
Condition 3: 24 Hour
Replicate 12.0725798191677
Replicate 21.8379382408814
Replicate 32.0519723143966


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94534.p1 GENE.R_Transcript_94534~~R_Transcript_94534.p1 ORF type:complete len:288 (+),score=47.53,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|7.2e-07,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|0.00071,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.0027,PPR|PF01535.16|2e-06,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.38,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.00088,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.0013 R_Transcript_94534:1186-2049(+)
ATGTTAGGGGAGGGGAAAATTGAGGAAGGGTTAGTTCTATTGAAAAGGTTGTTGCAAAAGAACTTAATCCTTGATACTATTTCTTACTCGATGGTTGTTTATGTGAAAGTCAAAAGTGGGGAATTGGAATCTGCAAGAGAAGTGTATGAAGAAATGCTGACCAGGGGTTTTAGTCCTAACTCTTTTGTGTACACCCTGTTTATTACAGCCTATATTAAGGAGGGGATGGTAGTTGAGGCCCTTGAATTGATGGAAGAAATGGTGAGCATAGGTCTAGAACCATATGATGAGACTTACAATTCTCTCATACTTGGCTGTGCAAAAACAGGTAATGTGGTAAATAGTGTCAGACTTTGTGAGGAAATGGTAGAAAAAGGTTTGATTCCAAGCTCTTCAGCTTTTAATGAAATTGTCGAAAAGCTATGTGAAGGTGGGAATATGGAGCAGGCCAATGAGATGTTAACTGGTTTAATGGGGAAAGGGTTTTTGCCCAACGAGACAACTTATTGTTTTTTGATTGATGGCTATAGAAGAGAGAGGAATATTGCAGAGGTTCTCAAATTGTACTACGAAATGGAATCTAGATCACTATCTCCTGGAGTTCCAAGTTTTACTTTACTGATCACGACACTGTGTGAGCATAAGAAATTAGAAGAAGCAGAGAAGTACTTTGCCAAAATGAAATCTCGAACATTGTGCCCAAACATATACATATATAAATCATTGATAGTTGCTTATGTTGAAAATGGAAACGAAGGAAGAGCTCATCAACTTTACAGCGAGATGCTTCAAAAGGGTTTGAAGATCATCATCAATAATAAATCGATCTCTTGTAGTCTTTCTTTTGAAGATCACAAGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94534.p1 GENE.R_Transcript_94534~~R_Transcript_94534.p1 ORF type:complete len:288 (+),score=47.53,PPR_2|PF13041.2|14,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|7.2e-07,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|0.00071,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.0027,PPR|PF01535.16|2e-06,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00053,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|0.0008,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.38,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.00088,PPR_3|PF13812.2|5.9e+03,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|0.24,PPR_3|PF13812.2|0.0013 R_Transcript_94534:1186-2049(+)
MLGEGKIEEGLVLLKRLLQKNLILDTISYSMVVYVKVKSGELESAREVYEEMLTRGFSPNSFVYTLFITAYIKEGMVVEALELMEEMVSIGLEPYDETYNSLILGCAKTGNVVNSVRLCEEMVEKGLIPSSSAFNEIVEKLCEGGNMEQANEMLTGLMGKGFLPNETTYCFLIDGYRRERNIAEVLKLYYEMESRSLSPGVPSFTLLITTLCEHKKLEEAEKYFAKMKSRTLCPNIYIYKSLIVAYVENGNEGRAHQLYSEMLQKGLKIIINNKSISCSLSFEDHKM*

Click here to download the sequence:
Link to NCBI Protein BLAST