Transcript Information: R_Transcript_94534.p2


Annotated TAIR IDAT1G66345.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:24737719-24739353 | Forward length=544
E-Value9E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95708409500398
Replicate 20.55046480492167
Replicate 30.77213722234222
Condition 2: 8 Hour
Replicate 10.55024415611787
Replicate 20.25124586338411
Replicate 31.0197534056397
Condition 3: 24 Hour
Replicate 11.8056702313925
Replicate 20.90864362470543
Replicate 30.81976422048305


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94534.p2 GENE.R_Transcript_94534~~R_Transcript_94534.p2 ORF type:complete len:267 (+),score=26.95,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|8.8e-06,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|0.0043 R_Transcript_94534:392-1192(+)
ATGGCTTTCATTTTTCGTCGCAGTACACCTCTTTTACTGAAGCTCTCTCTTTCAATTGGCAAAACCACCAGACTGAATTGCGTCTTTAGTCATCAGTTAGTTGGTCCTGACCCTTCTCATGCAATTGTAGAAACAATTTGTGAGTCTCTCAGGAAAGGCTTGAACTGGGATGCTTTGAGCAGAAAATTTGATTATGCGGATTTGAGTGACTGTATTATCGAGAAAGTACTTCTAGAGTTTAAGGAACCCAATGAGGCGAAAAGAGCACTAAGTTTTTTCCATTGGGTTGCACATAACAAGAAGGTTGATCGTGGACTTGAGCCGTATTGTATCACCATTCATATTTTGGCCCGTGCACGTCTCATAAACGATGCCTGTGGTCTGCTAGAGTCTGTCTTGATGAAGAATAAGGAGAATAGTGTTGATGACTCTTTGAGGTTTTCTGTTGTTGATATGCTGTTGAGTACGTACAGGATTACGAACTCTAGCCCTTTTGTTTTTGACTTGTTGGTGCGAACTTATAGTAAGCTAAGATTGTTCGAAACTGCTTTTGATGTCAGCTGTTACTTAGATGAACATGGATTCTGTTTGAACATTAGGACTTTCAACACTTTACTTTATAGCATACAAAAATCAGCAGGCACAGATGGCTTGATTTGGAAGGTATATGGGCATATGATTCAGAAGAGAATATACCCAAACGATCTGACAGTTAGAATTATGATCAATGCATTGTGTAAGGCTGGTGAGCTTCAACGCTTTGTGGACATTATTGATAGGATTCATGGCAAAAAATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94534.p2 GENE.R_Transcript_94534~~R_Transcript_94534.p2 ORF type:complete len:267 (+),score=26.95,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|8.8e-06,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|0.0043 R_Transcript_94534:392-1192(+)
MAFIFRRSTPLLLKLSLSIGKTTRLNCVFSHQLVGPDPSHAIVETICESLRKGLNWDALSRKFDYADLSDCIIEKVLLEFKEPNEAKRALSFFHWVAHNKKVDRGLEPYCITIHILARARLINDACGLLESVLMKNKENSVDDSLRFSVVDMLLSTYRITNSSPFVFDLLVRTYSKLRLFETAFDVSCYLDEHGFCLNIRTFNTLLYSIQKSAGTDGLIWKVYGHMIQKRIYPNDLTVRIMINALCKAGELQRFVDIIDRIHGKKC*

Click here to download the sequence:
Link to NCBI Protein BLAST