Transcript Information: R_Transcript_94571.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.461324753739
Replicate 22.847902450083
Replicate 33.6248693802422
Condition 2: 8 Hour
Replicate 12.1815863716296
Replicate 20.92179167164462
Replicate 32.8241202693953
Condition 3: 24 Hour
Replicate 14.8235818377357
Replicate 23.6954290162403
Replicate 35.0935482981476


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94571.p1 GENE.R_Transcript_94571~~R_Transcript_94571.p1 ORF type:complete len:752 (+),score=63.13,MS_channel|PF00924.14|4.5e-06 R_Transcript_94571:171-2426(+)
ATGTGTTTGTTTGAGTGTTTAGGTTATCTATGCAAGTGTTTCGGTTACTTGATATTGGGTGTCTGTTACTTGATAGGCCTGGTGTTAAATTGTTTCTGTTGCTTATTTTGTTGTTCTGTTGAATTGGCGGTTAGGGTAGCTTTGTCCGTGTTTCGTCTAGTGTTGGTAGCGGTTTTGGCTGCTTGCTTGTGCTTGGTGAACACAGCCGTGTCAACAGTTTGTGTTCTCCTTTACTTCACCATTCGCTTCCTTGAATTTGTGACTAGTGGTGATCATCATAATAATAGTACTAATAGTTTGTTCATAGATATCTCTAGACATAGTGGTAATTTTGGGGATTCTCTTGCCAATGGTATCATATATGGTTCCTTGGTTAACCTTTTATTAGGTTGGGATATTTGGTGGTTCATACTTTGCTACTATGCTCCAAATTTAAAACACCATGTAATTCTAGAACTAGAGCTCATCAAGTGGGTCCAGTTGTTTATGATATTCTCTGCTTTATGTATACCATTAATGTTGCCTCGCTTCATCTTGGCCTCGACCGAGAGTGTAAACCATTATCGTCAGCTCTTTGATGGTGTAGTCGGGGTAATTGAATGCACTGTTTTCATATTAGCACAATTGGCTGTTATGAAACACGCACCCAATTGGACCCGTCACATGGCTCTTGGTTTCGAAACCTGGAGGTTAATCCAAGTATTAGCTCTAATCCTTCTTGGGATTATGATAATCAACGTCATCACACGTCTAATTGTTCACATCCTCAATTTTGTTGATGCTCATTGTACTAAACATGTTGCTTATTTTAGTTATGGCCTTAGACCGAACATCAATTTCATGTTTACTTGGACCTACTTGACGGCTATTTGGCTTCTTTATTTTGTCCCCCACTTTAATAAAACTGGGGTTTGGACTAACAAAAGAGCAATGGAATTAGTCTCATGGGGTTTTGTTTGTGTGGCAATTGGTTCCTTCTTGTGGTTCATCAAAAAATTGGTTGTTCTACTGTGGGAGGCTCATGCAGTTTATGATAGGTTTAGTGAGAAAATTATACAAGCAGGATCACAATTCTACTTCATCCGTCTTATCTTTGATAAAGAATTTTTGACGGACAAAAACCGTCGCCATAACGATGAACCATTGTTCAACTACTTAGGGAAGTATTTACGTAACCGGGGGAATAATGAGCAGCAACAGGTAGAAAATCAAGAACAGAAAAAGCAAGATGCCAAAGAAATCTTAGTCCAACAAGAACATCGCCTCACAACTTATGATCTACAAAGTATGACTGATTACTACAAACATCTTTATGGTCAAGACAATTGGTTGCAAGACAACGAGTACACCGAAGATAACAACACTACAACTCCGTCGCCTACATCTGATCAAATGGAAAAAATAACCAAACCCAACGATATGAGGATGGCCATCAAACGCATGTACGTGAAGACATTAGACTTGGAAGATGCAGAAACATTGCTCAATCAAATGAAGTCAGACACAAAAAGTGCTATCATCGATGATAAAGGAATCAAGAAATGGATGGCAAAAGCTTACGAAAACTGTTCGGAATTGGGGAACACACTACTTGATGCGAACGAAGTTACAAGCTATTTGAACAAACTTCTGATTGGATTCTTTCTGCCTTTAATCATACTGATCTGGCTTCTTGCTACAAAGATAGCAAGCATAGATTTGCTCATTCTGGTGACATCACCCATTTTGACCGCCAAATTTATCTTTGGTGGTACTTGCAAGAGTATTTTTCAAGGAATCATATTCACATTTGTCTTGCATCTTTTTGATGTGGGTGACACATGTATCATCAATGGTGCTAAGATGGAGGTCAAACGAATTGGTATTTGGACTACAACCTTCCGGAAAGTCGACACTAAGGAAATGGTGATTTATCGAAATTCAATTTTGGCAGACAAGGTTATTATCAAACAAACAGGTTTGAATTTGAATGACTCCGTGGAGTACTCTGTGCCTGTTACCATTTGGGATCAGAGTACTCTCGAGGATTTAAAGGCAACAATTCAGAGATTCATTGATCGCAATTCTGCTGAGTATGACAAACATTCTCTTGCTGTATTGGTGAAAGAGGTTGGACACAAAGTGAAGATAGTTATTCAATTTAAACATAAGGCTAGCGGTCAAGATATGATTAATTCTGAAGTTCTCAAAGAGCAAAAAATAAGAAGACAGAATATTTTGATGGAAGTGAAGGAATTTTTTGATGGAAAGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94571.p1 GENE.R_Transcript_94571~~R_Transcript_94571.p1 ORF type:complete len:752 (+),score=63.13,MS_channel|PF00924.14|4.5e-06 R_Transcript_94571:171-2426(+)
MCLFECLGYLCKCFGYLILGVCYLIGLVLNCFCCLFCCSVELAVRVALSVFRLVLVAVLAACLCLVNTAVSTVCVLLYFTIRFLEFVTSGDHHNNSTNSLFIDISRHSGNFGDSLANGIIYGSLVNLLLGWDIWWFILCYYAPNLKHHVILELELIKWVQLFMIFSALCIPLMLPRFILASTESVNHYRQLFDGVVGVIECTVFILAQLAVMKHAPNWTRHMALGFETWRLIQVLALILLGIMIINVITRLIVHILNFVDAHCTKHVAYFSYGLRPNINFMFTWTYLTAIWLLYFVPHFNKTGVWTNKRAMELVSWGFVCVAIGSFLWFIKKLVVLLWEAHAVYDRFSEKIIQAGSQFYFIRLIFDKEFLTDKNRRHNDEPLFNYLGKYLRNRGNNEQQQVENQEQKKQDAKEILVQQEHRLTTYDLQSMTDYYKHLYGQDNWLQDNEYTEDNNTTTPSPTSDQMEKITKPNDMRMAIKRMYVKTLDLEDAETLLNQMKSDTKSAIIDDKGIKKWMAKAYENCSELGNTLLDANEVTSYLNKLLIGFFLPLIILIWLLATKIASIDLLILVTSPILTAKFIFGGTCKSIFQGIIFTFVLHLFDVGDTCIINGAKMEVKRIGIWTTTFRKVDTKEMVIYRNSILADKVIIKQTGLNLNDSVEYSVPVTIWDQSTLEDLKATIQRFIDRNSAEYDKHSLAVLVKEVGHKVKIVIQFKHKASGQDMINSEVLKEQKIRRQNILMEVKEFFDGKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST