Transcript Information: R_Transcript_94638.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value7.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2800046376582
Replicate 23.4752497240769
Replicate 35.3712350225461
Condition 2: 8 Hour
Replicate 11.8575483753083
Replicate 22.9300465860864
Replicate 33.3799550810376
Condition 3: 24 Hour
Replicate 15.0665505605968
Replicate 24.2589465443873
Replicate 38.0003334372797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94638.p1 GENE.R_Transcript_94638~~R_Transcript_94638.p1 ORF type:5prime_partial len:145 (+),score=13.06,DUF640|PF04852.8|4.3e-40 R_Transcript_94638:2-436(+)
CTGGACCAGTTCGGGAAGACCAAAGTCCACAACCCGCCTTGCCCCTTCTTCGGTCACCCGAACCCGCCTGCCCCCTGCCCGTGCCCGCTTCGGCAGGCTTGGGGCTCCCTCGACGCTCTCATAGGCCGCCTTCGTGCTGCCTACGAGGAGCACGGTGGGGCCCCAGAGAGCAACCCTTTCGGAGCTAGAGCCGTCCGTCTCTACCTCCGCGAGGTCAGGGACTCGCAATCCAAGGCCAGAGGGGTCTCCTACGAGAAGAAGAAGCGGAAGCGACCGACCGCTTCCTCCCTCGCTCCGCCGCCTCAACAGCACCACCACCACCTCGCCCTCCATGGTGAGACCAGCGGCGGCGGACAACTCGGGACTGGTCTCGCCATGGATTATCCTAGTCCTGGTAGTGGTGGTGGTGCTGCTGGGGATCGGAATTTCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94638.p1 GENE.R_Transcript_94638~~R_Transcript_94638.p1 ORF type:5prime_partial len:145 (+),score=13.06,DUF640|PF04852.8|4.3e-40 R_Transcript_94638:2-436(+)
LDQFGKTKVHNPPCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGAPESNPFGARAVRLYLREVRDSQSKARGVSYEKKKRKRPTASSLAPPPQQHHHHLALHGETSGGGQLGTGLAMDYPSPGSGGGAAGDRNFR*

Click here to download the sequence:
Link to NCBI Protein BLAST