Transcript Information: R_Transcript_94758.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1972049254166
Replicate 25.9508231126406
Replicate 36.0023002257298
Condition 2: 8 Hour
Replicate 15.1066777162704
Replicate 29.6857295675724
Replicate 310.96862032141
Condition 3: 24 Hour
Replicate 17.3661413564826
Replicate 26.9586110938185
Replicate 36.203467103773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_94758.p1 GENE.R_Transcript_94758~~R_Transcript_94758.p1 ORF type:5prime_partial len:187 (+),score=15.78,gag_pre-integrs|PF13976.2|3.2e-16 R_Transcript_94758:1-561(+)
GAAGATTCGGGAGCAAGCAAGCACGTAGTTCATGATAGAGAAGCCTTTGTGGACTATCATCATCTACCGGTGGGTTCACAAACTGTCGTATTAGGGAACGACAGCGAGGAAAACGTCCTCGGGATCGGAACTTACAAGCTCAAGCTGCGTGGAGGAAATGAGTTGCTCCTGCATGATACCCTCTATGCACCTGGGGTGCGATGTTGTTTGCTTTCAGTAGTTTCATTATTAACACTTGGTTTCTCTTTTAATTTTCATTCACGTGGTTTGGACATCTTGTACCATGACAATTTGTTTGGTCGTGGAATTTTGAAGAACGGTTTTTTCATACTTGATTTAGATTATAATAAATCCTCGTTTGCTTTAGTTACGCAATTTGATAGTAATTCTGAATCTGTTTTATGGCATTCTAGGCTTGGTCACATAGGACAAGATAGAATGAATAGACTGGCAAAAGATGGTCTTTTAGACCGTCTCACCAAGGTTAAGTTGCCTAGGTGTGAGCCATGTTTAGCTGGCAAGGCTAGTAAGAAACCTTTTGGTAAGGCTTCAAGGGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_94758.p1 GENE.R_Transcript_94758~~R_Transcript_94758.p1 ORF type:5prime_partial len:187 (+),score=15.78,gag_pre-integrs|PF13976.2|3.2e-16 R_Transcript_94758:1-561(+)
EDSGASKHVVHDREAFVDYHHLPVGSQTVVLGNDSEENVLGIGTYKLKLRGGNELLLHDTLYAPGVRCCLLSVVSLLTLGFSFNFHSRGLDILYHDNLFGRGILKNGFFILDLDYNKSSFALVTQFDSNSESVLWHSRLGHIGQDRMNRLAKDGLLDRLTKVKLPRCEPCLAGKASKKPFGKASRA*

Click here to download the sequence:
Link to NCBI Protein BLAST