Transcript Information: R_Transcript_95246.p1


Annotated TAIR IDAT3G28140.1
Annotated Gene NameRNA ligase/cyclic nucleotide phosphodiesterase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10470552-10471106 | Forward length=184
E-Value4.5E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.96224763451
Replicate 29.5852675813535
Replicate 312.615304763098
Condition 2: 8 Hour
Replicate 110.113726826036
Replicate 212.152653174557
Replicate 317.493943568924
Condition 3: 24 Hour
Replicate 113.142512833251
Replicate 213.584760910863
Replicate 318.081147350046


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95246.p1 GENE.R_Transcript_95246~~R_Transcript_95246.p1 ORF type:internal len:138 (-),score=16.97,2_5_RNA_ligase2|PF13563.2|1.1e-06 R_Transcript_95246:3-413(-)
AAAAAGAAAACCCCATTTCACTTTTTATTTGTAGCAATGTCACAAGGCTATGCAATTGAACTTTACTTCGATCCAGCCCTAGAAAACCAAGTCCTGAAAGCATGGAATGTTCTAGCTCGTCGCCAAATCAGTACCCAACTTATAGAAATTGAGTCTCGTCCCCACATAACCCTCTTTTCAACCCCATCTTTCATTGACCCTTCAAAGCTTGAACCTTTGATCAAATCATTTGCTCAAAAACAAGACCCTTTACTTCTCAATTTCTCCTCAATTGGGTCCTTTCCTGATGACAGTAATACCCTTTTCTTATCTCCAACCCCCACATTGTCTTTGCTCCAGTTTCAGACCCAACTTTGTGATCTCCTCAAGAAGGAAGCCACCATTGAAATTGGGGATGAATTCCGGGTCGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95246.p1 GENE.R_Transcript_95246~~R_Transcript_95246.p1 ORF type:internal len:138 (-),score=16.97,2_5_RNA_ligase2|PF13563.2|1.1e-06 R_Transcript_95246:3-413(-)
KKKTPFHFLFVAMSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPSFIDPSKLEPLIKSFAQKQDPLLLNFSSIGSFPDDSNTLFLSPTPTLSLLQFQTQLCDLLKKEATIEIGDEFRVD

Click here to download the sequence:
Link to NCBI Protein BLAST