Transcript Information: R_Transcript_95396.p1


Annotated TAIR IDAT2G24120.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)PDE319, SCA3
Annotation TypeOrtholog
Chromosome Positionchr2:10249358-10254530 | Reverse length=993
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0655164751207
Replicate 21.5717000311624
Replicate 32.4401611066919
Condition 2: 8 Hour
Replicate 11.8564139451366
Replicate 22.0815792117035
Replicate 33.1704348684361
Condition 3: 24 Hour
Replicate 12.4235689011972
Replicate 21.7991334027822
Replicate 32.1215529494977


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95396.p1 GENE.R_Transcript_95396~~R_Transcript_95396.p1 ORF type:complete len:1042 (+),score=217.44,RNA_pol|PF00940.15|1.7e-160,RPOL_N|PF14700.2|1.4e-79 R_Transcript_95396:165-3128(+)
ATGTCATCAACAGCTTCATTCACTGCAATTCCACAAGTTCAAATTCACAAAACCCATTTTTCACTACTTATCCCATCACCCAATAACAGTCATTTGAGAATTCTAAAGCTCAATGAACCCCAACTTTGTTTCCCTTCAAACCTCTCATTACCTTCTTTGAACCAAAAACTGTGTAAAAAGAACAGCTTTTACCCACCTTATCTACAATCCCAGATAATACTAGACTCCCCTGAAGAAGATTTGGCTGATGTGGGTAGTACTAGTTCTAGTAGTAATGATAAAAAGTTAGTAGTTAAGAAAAATGATGGTAATAATAATGGAAGTATTCAGTTAAATGGGAGGATTTTTATGCAGGACCCACCTTGGGTAAATGCTCTTTTTATGAGAGGTTTATGTGAGAGTTGTAGTAGTAATGGGTTGAAGTTGGAATTCAAAGAAATTGAGAGACAAAAGTATAATATGTTGAGGAAAAGACAGATAAAGGCTGAGACTGAGGTTTGGGAGAAAATGGTGGAAGAGTATAGGGAATTTGTGAAGGAAATGAGGGATAAGAAATTGGCACCTAATTTGCCACAAGTGAAGGCTTTGTTTTTGGGTTGGTTTGAGCCTTTGAAGAAGGCTATTGAGAAGGAACAAAAGTTGCAAAGGTCTAGGAAACAAAAGGCTGTTTATGGGTTTCATATAGATATGTTGCCTGCTGATAAGATGGCTGTTATAGTTATGCATAAGATGTTGGCTTTGATGATGGTGGGCAATGAGGCTGGTTGTGTTAGACTTGTTCAAGCTGCTCTTCAGATTGGGATTGCCATTGAACAGGAGATAAAAATTCATGGTTTCTTGGAGAAAACCAAGAATATACGGAAAAATGCAACTGACATGCCAGAGGATTTATTAAAGGAAAAGGAGATTCAACGGAATCGTGTGAAGACCTTAGTAAAGAGGAAAAGGCTATTTGAAGCAGCAAGGATGGTGACAACTGAAGATGGCAAGTCTTGGAGTCAAGACACCCAAGCCAAGTTGGGCAGTCGTCTGATAGAATTGCTTATAGAAACAGCTTATGTACAGCATCCAGCCAGTCAATCTGCAGACAGTCCACCTGATGTTCGACCTGCATTTAGGCACAAGTTCAAAATTTTGAACAATGAACTAGGACAGCAAGTGGTGAAGAGATACGGAGTTATAGAATGTGATCCAATAGTCTTGCAAGGGATTGATAGGAGTGCACGGTATATGGTGATCCCTTATGTCCCAATGTTAATACCTCCGAAGAACTGGAGAGGGTATGACAAGGGTGGGTACTTATTCCTACCTTCTTATGTTATGCGAACTCATGGATCACGGAAGCAGCAGGATGCAATGAGGAAAACTCCACCACAGCAAATGCAGAAAGTTTTTGAGGCCTTGAATACGCTTGGAAACACAAAATGGAGGATCAACAGAAAAGTTCTTGACGTGGTGGAAAGCCTTTGGGCTAGCGGTGGCAACATTGCTGGCCTTGTTAATTGTGAAGATGTTCCTATACCAGAGAAGCCAGAGTCAGAGGATCCAGCAGAAATTGATGCATGGAAATGGAGTGTCAGGAAAGCAAAGAAAATCAATAGAGAGAGACATGCTTTACGATGTGATGTTGAACTCAAACTTTCCGTTGCTCGAAAGATGAAAGATGAAGAAGGCTTCTATTATCCTCATAATCTCGATTTTCGTGGTCGAGCTTATCCCATGCACCCCCATTTAAATCATCTGAGTTCTGATCTTTGTCGAGGTGTACTTGAATTCTCTGAAGGATGGCCTTTAGGGAAATCTGGATTGCATTGGCTGAAGATACATTTAGCAAACGTATATGCTGGTGGTGTTGACAAGCTCTCATACGAGGAGCGTGTAGCATTTGTAGAAAATCATCTTGATGACATATTTGAATCAGCTAACAACCCTATCTATGGCAAGCGTTGGTGGTTGACTGCAGAAGATCCTTTTCAATGTTTAGCTGCTTGTATTGATCTATCAGAAGCCCTGAACAGTTCATCACCACATAATCTCATCTCCCACCTTCCAATACATCAGGATGGTTCATGCAATGGCTTACAGCATTATGCTGCTTTGGGAAGAGACAGTAAAGAAGCGGCAGCAGTCAACTTAGTTGCAGGAGAGAAACCAGCTGATGTGTATTCCGAAATTGCTGCAAGGGTTCGTGACATTATGGAAAAGGATAGCAGGAAAAACCCTGAAACTGACCCCAATGCTTCATTAGCCAAGGTCTTAGTTGATCAGGTGGACCGCAAACTGGTGAAGCAGACAGTAATGACTTCGGTATATGGTGTTACTTTTGTTGGGGCAAGGGAGCAAATTAAGAGGAGGCTAGAAGAGAAGGGTCTTATAACTGACGATAGGCTGTTATTCTCTGCAGCCTGTTATTCTGCTAAGGTAACAATGTCTGCCCTTGGTCAGTTATTTCAAGCTGCACGTGGTATAATGGATTGGCTTGGTGATTGTGCTAAGGTTATTGCGTCTGAGAATCAACCTGTTCGTTGGACCACTCCTCTGGGTCTCCCAGTTGTACAGCCGTACTGTAAAAGTAAACGACATCTTATAAAAACATCTCTTCAGGTTTTGGCCTTGCAGCAGGAGGGTGATGCGATTGAAGTTAAAAAACAACGGACTGCATTCCCTCCAAACTATGTTCACTCACTTGATGGAACTCACATGATGATGACTGCCGTGGCATGCCGGGATGCTGGTTTACAGTTTGCAGGGGTGCATGACTCATTTTGGACACATGCTTGCGATGTAGATCAGATGAACCGAATTCTTCGAGAAAAATTTGTGGAGCTATATGACATGCCCATACTAGAAAACTTGCTTGAAGGTTTCCAAGAATCATATCCGGGACTGGTTTTCCCACCTTTGCCCGATAGAGGGGATTTCGACTTACAAGAAGTCCTTGAATCACCATACTTCTTTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95396.p1 GENE.R_Transcript_95396~~R_Transcript_95396.p1 ORF type:complete len:1042 (+),score=217.44,RNA_pol|PF00940.15|1.7e-160,RPOL_N|PF14700.2|1.4e-79 R_Transcript_95396:165-3128(+)
MSSTASFTAIPQVQIHKTHFSLLIPSPNNSHLRILKLNEPQLCFPSNLSLPSLNQKLCKKNSFYPPYLQSQIILDSPEEDLADVGSTSSSSNDKKLVVKKNDGNNNGSIQLNGRIFMQDPPWVNALFMRGLCESCSSNGLKLEFKEIERQKYNMLRKRQIKAETEVWEKMVEEYREFVKEMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKLQRSRKQKAVYGFHIDMLPADKMAVIVMHKMLALMMVGNEAGCVRLVQAALQIGIAIEQEIKIHGFLEKTKNIRKNATDMPEDLLKEKEIQRNRVKTLVKRKRLFEAARMVTTEDGKSWSQDTQAKLGSRLIELLIETAYVQHPASQSADSPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPIVLQGIDRSARYMVIPYVPMLIPPKNWRGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGNTKWRINRKVLDVVESLWASGGNIAGLVNCEDVPIPEKPESEDPAEIDAWKWSVRKAKKINRERHALRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFSEGWPLGKSGLHWLKIHLANVYAGGVDKLSYEERVAFVENHLDDIFESANNPIYGKRWWLTAEDPFQCLAACIDLSEALNSSSPHNLISHLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGEKPADVYSEIAARVRDIMEKDSRKNPETDPNASLAKVLVDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGLITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGDAIEVKKQRTAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYDMPILENLLEGFQESYPGLVFPPLPDRGDFDLQEVLESPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST