Transcript Information: R_Transcript_9558.p1


Annotated TAIR IDAT1G65660.1
Annotated Gene NamePre-mRNA splicing Prp18-interacting factor
Annotated Gene Symbol(s)SMP1
Annotation TypeOrtholog
Chromosome Positionchr1:24418295-24421231 | Reverse length=535
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.760692099292
Replicate 245.951237879662
Replicate 358.769966328021
Condition 2: 8 Hour
Replicate 166.623277638345
Replicate 286.79824744268
Replicate 396.495438344238
Condition 3: 24 Hour
Replicate 176.214827691232
Replicate 254.995460708667
Replicate 371.003552172837


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9558.p1 GENE.R_Transcript_9558~~R_Transcript_9558.p1 ORF type:complete len:541 (+),score=172.57,Slu7|PF11708.4|1.9e-95,Slu7|PF11708.4|3.3e+02 R_Transcript_9558:295-1917(+)
ATGGCTACCGCTTCAGTGGCATTTAAATCTAGGGAAGACCATAGGAAGCAGCTGGAATTGGAGGAAGCTCGTAAAGCTGGGCTTGCTCCAGCTGAAGTCGATGAAGATGGAAAAGAAATCAATCCTCATATTCCACAGTATATGTCTTCAGCTCCTTGGTACCTGAATTCTGATAAACCTAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCTAATTACACGAAATCTTGGTATAATAGAGGTGAAAAAGGTTACCAGGCTGAAAAGTACCGGAAGGGTTCATGTGCAAATTGTGGAGCTATGACACATGATGCAAAGTCATGCATGGACAGGCCTAGGAAAGTGGGGGCAAAGTGGACAGGGAAGCATATTGCCCCAGATGAGATTATAGAGGAGTTTGAGCTGGACTTTGACGGAAAACGTGATAGGTGGAATGGTTTTGATCCAGCAAGTTATGCCTATGTTGTCCACCGGTATGAAGCAAAGGAAGAAGCCAGGAGAAAATTCCTTAAGGAGCAGCAGTTGAAAAAGCTTGAAGAGAAGAACAATAAAACAGGTGAGGAGCGTGGTGCCAGTGATGAGGAGGACGATGATGATGATGATGATGATGCTCTGAAGGTCGATGAGGCCAAGGTTGATGAAAGCAAGCAAATGGACTTTGCCAAGGTTGAGAAGCGTGTTCGTACAACTGGTGGAGGAAGTACTGGAACTGTAAGAAACCTGCGTATTCGAGAGGATACTGCGAAATATCTATTGAATCTCGATGTCAATTCAGCCTACTATGATCCTAAAACACGGTCCATGCGTGAAGATCCTCTCCCAGATGCTGATCCCAATGAGAAATTTTATGCTGGTGATAATCAAAATAGGCTTAGTGGTCAAGCTCTGGAGTTCAAGAGTCTTAATTTACATGCTTTTGAGGCATTTGACAAGGGGCAAGATGTTCACTTGCAAGCAGCGCCATCCCAAGCTGAGTTGCTCTACAAGAATTTCAAAGTCAATAAAGATAAATTGAAGTCTCATATGAAGGACACAGTCATGGAGAAATATGGCAATGCTGCAGCAGAAGAGGAGATTCCACGAGAGCTTCTCCTTGGTCAAAGTGAAAGACAAGTTGAATATGATCGTGCTGGTCGGATTATCAAGGGGCAGGAGACTGCACTCCCCAAAAGTAAATACGAAGAAGATGTATACACAAATAATCACACTAGTGTTTGGGGATCATGGTGGAAAGATTTCCAGTGGGGCTACAAATGCTGTAGGCAGACCATTCGAAACAGCTATTGTACGGGTGCTGCTGGAATTGAGGCTGCAGAAGCATCAGGAGAGCTGATGAAAGCTAATATTGCACGCAAAGAAGCCTCTGAAGAAAAAGCTGCGCCTACCGAGGAGAAGAGGCTGGCTACTTGGGGAACAGATGTGCCAGAAGATTTGGTTCTGGATCAGAAGAAATTAGCTGATGCTCTGAAGAAGGAGGATGAAAAGAGAAGAGAAGAGAGGGATGAAAGAAAGCGCAAATACAATGTCAAATACAACGATGATGTGACACCAGAGGAGATGGAGGCATATAGAATGAAGAGGGTACTCCATGACGATCCAATGAGGGATTTCCTGCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9558.p1 GENE.R_Transcript_9558~~R_Transcript_9558.p1 ORF type:complete len:541 (+),score=172.57,Slu7|PF11708.4|1.9e-95,Slu7|PF11708.4|3.3e+02 R_Transcript_9558:295-1917(+)
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSDKPSLKHQRKWKSDPNYTKSWYNRGEKGYQAEKYRKGSCANCGAMTHDAKSCMDRPRKVGAKWTGKHIAPDEIIEEFELDFDGKRDRWNGFDPASYAYVVHRYEAKEEARRKFLKEQQLKKLEEKNNKTGEERGASDEEDDDDDDDDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYAGDNQNRLSGQALEFKSLNLHAFEAFDKGQDVHLQAAPSQAELLYKNFKVNKDKLKSHMKDTVMEKYGNAAAEEEIPRELLLGQSERQVEYDRAGRIIKGQETALPKSKYEEDVYTNNHTSVWGSWWKDFQWGYKCCRQTIRNSYCTGAAGIEAAEASGELMKANIARKEASEEKAAPTEEKRLATWGTDVPEDLVLDQKKLADALKKEDEKRREERDERKRKYNVKYNDDVTPEEMEAYRMKRVLHDDPMRDFLH*

Click here to download the sequence:
Link to NCBI Protein BLAST