Transcript Information: R_Transcript_9561.p3


Annotated TAIR IDAT5G19810.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6693052-6693801 | Forward length=249
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.69419684386
Replicate 220.139308562572
Replicate 328.984035325744
Condition 2: 8 Hour
Replicate 171.458748723593
Replicate 2113.40161505173
Replicate 3106.87223804044
Condition 3: 24 Hour
Replicate 131.157024094741
Replicate 231.957620025122
Replicate 338.191811239382


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9561.p3 GENE.R_Transcript_9561~~R_Transcript_9561.p3 ORF type:3prime_partial len:98 (+),score=27.55,Ice_nucleation|PF00818.13|2.3e+02,Ice_nucleation|PF00818.13|0.094,Ice_nucleation|PF00818.13|0.085,Ice_nucleation|PF00818.13|0.094,Ice_nucleation|PF00818.13|5.4 R_Transcript_9561:195-485(+)
ATGTTCCACCACCACAAGAAAACCGAGGAGGACCAACCCTCCGACTATTCCACTGAAACCAACCGCTATGGATCTGATGACACCACCACCGGTGGTGGCTATGGATCCACTGAGACCAACCGCTATGGCTCTGATGACACCACCACCGGTGGTGGCTATGGATCCACTGAGACCAACCGCGATGGCTCTGATGACACCACCACCGGTGGTGGCTATGGATCCACTGAAACCAACCGCTATGGCTCTGATGACACCACCACCGGTGGTGGCTATGGATCCACTGAGACCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9561.p3 GENE.R_Transcript_9561~~R_Transcript_9561.p3 ORF type:3prime_partial len:98 (+),score=27.55,Ice_nucleation|PF00818.13|2.3e+02,Ice_nucleation|PF00818.13|0.094,Ice_nucleation|PF00818.13|0.085,Ice_nucleation|PF00818.13|0.094,Ice_nucleation|PF00818.13|5.4 R_Transcript_9561:195-485(+)
MFHHHKKTEEDQPSDYSTETNRYGSDDTTTGGGYGSTETNRYGSDDTTTGGGYGSTETNRDGSDDTTTGGGYGSTETNRYGSDDTTTGGGYGSTETN

Click here to download the sequence:
Link to NCBI Protein BLAST