Transcript Information: R_Transcript_95641.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value2.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6273070687714
Replicate 21.6846957243389
Replicate 31.327433530832
Condition 2: 8 Hour
Replicate 12.2557557603703
Replicate 21.4287041889613
Replicate 31.6452425673753
Condition 3: 24 Hour
Replicate 11.3645056301756
Replicate 21.8352072776706
Replicate 31.8863103593463


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95641.p1 GENE.R_Transcript_95641~~R_Transcript_95641.p1 ORF type:complete len:673 (+),score=209.79,SIP1|PF04938.8|4.2e-71 R_Transcript_95641:159-2177(+)
ATGACAGAAGAGTTTCCTGGTGATAGTGATACCTCTTCCCTTTCCCTGAAGCCAACAATCACCATTTCTAACAACATGAACAACAACAACCAGCAACCTGCCTCAGTTGTTGATGAAATCCCAGAAGACCAATTCTTGAGTTGCTCCCCCAAGAAGCCCAACTTGGAGCAAGAAATTCCCCCTCAAACTGTTAATGTTACTGTAACTGATGAACTGGGTACTCAACTTCTTGGAGGTAACTCTGAACCCCTTCAAGTTTCTGATCAACTTTCCACTACTCATGATACTAAAGCTGAGTTTCTTGCAACTGGGGATGAGTCTAATGAGAACCCCACTTCAGAGAATCAATTTGTTGGGTTTGATTCTGAGGAAAAGATTGAAAATTTTGAGTACCCATCTGTTGTTTATGATGTGAACAAGGGAAATGATGAAACTCCCCTCGAGGGTTTAAATCTTGGTGGTAACCATCAGTTTGTTGGGATTAATTCAGAGAAAAAGATTGAGGATTTTGAGTACCCATCTGAGAATAAGGGAACTGATGTGAATAAGGGAAATGATGAAACTCCCCTCGAGGGTTTAAATCTTGGTGGTAACCATCAGTTTGTTGGGATTAATTCAGAGAAAAAGATTGAGGATTTTGAGTACCCATCTGAGAATAAGGGAACTGATGTGAATAAGGAGAATGATGAAACTTCCCTCAAGGGTTTGAATCTTGGTGGTATTACTGATAATTTGAATGAGAATTTTGGTGGGTTCTTGGGAAAATTGGTGAAGAATGATGGAATTACTGATAATGTGAATAATGGTGATGTTTTAACCACCTGTTCACTGAAGATTGAGGTGATTGATGGAACAGCTGTTGTTGATGTTTTCAACAATAATAATGGCAAGAAAAATAAAAGGAGGGGTAAAAAGGGCAATAATAGTACAAATGGTAAGGCTTCAAATGGTGGGAAAAGTAAGTTTATGTACTCAAGGAAAGATATGGAAGCTTTGAGGTTTGTGAATGTTAAAGGGCAGAAGAAGTTCTGGCAAAAGACATACTCTGGGTTTGAACAAACTGTTAAGAAAGAGTATGATGAGCTGGGTAGTTTTAATAAGCATCATCACAAGCATGGGGAGAATCGCCACCAAGCTCGTCACATGAGGAACATCTTCCATGGCCAAGGAATTCTGGGAGAATCATCTTCAGAAAATGTGAGTTGTGATGCTGAAATTAGTGGTTCCGCAGATTTTGTCTCTGATGGTGAGAACAGTGCCAAGCATGGTGATGCTTTAGTGGGTGAGTTGAGTGAATATGAAGAGAGTGATGATGATGACGAGAACATCCAAAAACCTGCTTTTTTGGTTGAAGGTGAACCAGATTTTGAATCTGGACCCCCAGAGGATGGTCTAGAATACCTTAGGCGTGTCAGGTGGGAAGCTAGGCAGATACCAAAGGTGAAAGTGGCCAAGATTGATAATAGTAAACTCAACAAGGAGCAGAGTGTTTACATGCCAAAGATTCCTGATATCGAGAAGTGCCCTCCACATCTTCTCCCACTGAAGCCGTGGGAAGATGAGTTTGTTGCAGATTTTAAAGAGTTGAGAATGGCATTACAGAGCCTAGACGATACCAGTGACGCAGAGACTGAAGACTCGCAAACAATTATTTTCAATCACTCAGCGCGTGCAAGCCGTTCTTCTAAGAGTTCGTTGTCACTTGAGTTACCATCAGGTGGTCCAACGTTAGCCTCAGTCCTGGAAATGGATCCAATGACTCGGGTTACAATGCTCAAAAGACGCGTAAGCTTGTTTGACAGTGCAAGTGATTTTTCGAAGGATGACTGTGCTTGGCTCTTTGCTCTTTGTGCTGTAATTGACATGCCCTTGGATGCTGACACTTCTGCATCTCTGCGTTGTCTACTTCGGAAGTGTGCCAAGTTACGTGCTGGAAAATCTGAAGTCGATGATGAGGTTGTAATACTGAATATTCTGGCAGCAATCTCGGGGAAGGTATTTGGGCAGTCAGAAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95641.p1 GENE.R_Transcript_95641~~R_Transcript_95641.p1 ORF type:complete len:673 (+),score=209.79,SIP1|PF04938.8|4.2e-71 R_Transcript_95641:159-2177(+)
MTEEFPGDSDTSSLSLKPTITISNNMNNNNQQPASVVDEIPEDQFLSCSPKKPNLEQEIPPQTVNVTVTDELGTQLLGGNSEPLQVSDQLSTTHDTKAEFLATGDESNENPTSENQFVGFDSEEKIENFEYPSVVYDVNKGNDETPLEGLNLGGNHQFVGINSEKKIEDFEYPSENKGTDVNKGNDETPLEGLNLGGNHQFVGINSEKKIEDFEYPSENKGTDVNKENDETSLKGLNLGGITDNLNENFGGFLGKLVKNDGITDNVNNGDVLTTCSLKIEVIDGTAVVDVFNNNNGKKNKRRGKKGNNSTNGKASNGGKSKFMYSRKDMEALRFVNVKGQKKFWQKTYSGFEQTVKKEYDELGSFNKHHHKHGENRHQARHMRNIFHGQGILGESSSENVSCDAEISGSADFVSDGENSAKHGDALVGELSEYEESDDDDENIQKPAFLVEGEPDFESGPPEDGLEYLRRVRWEARQIPKVKVAKIDNSKLNKEQSVYMPKIPDIEKCPPHLLPLKPWEDEFVADFKELRMALQSLDDTSDAETEDSQTIIFNHSARASRSSKSSLSLELPSGGPTLASVLEMDPMTRVTMLKRRVSLFDSASDFSKDDCAWLFALCAVIDMPLDADTSASLRCLLRKCAKLRAGKSEVDDEVVILNILAAISGKVFGQSEA*

Click here to download the sequence:
Link to NCBI Protein BLAST