Transcript Information: R_Transcript_95642.p1


Annotated TAIR IDAT1G54380.1
Annotated Gene Namespliceosome protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20298287-20300899 | Reverse length=515
E-Value1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0996504165704
Replicate 21.5779428226973
Replicate 31.6863855899008
Condition 2: 8 Hour
Replicate 12.253300455268
Replicate 22.9494414698496
Replicate 33.3964670179252
Condition 3: 24 Hour
Replicate 12.359161172172
Replicate 21.0486396098281
Replicate 31.9470657543559


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95642.p1 GENE.R_Transcript_95642~~R_Transcript_95642.p1 ORF type:complete len:652 (+),score=192.67,SIP1|PF04938.8|3.9e-71 R_Transcript_95642:72-1958(+)
ATGACAGAAGAGTTTCCTGGTGATAGTGATACCTCTTCCCTTTCCCTGAAGCCAACAATCACCATTTCTAACAACATGAACAACAACAACCAGCAACCTGCCTCAGTTGTTGATGAAATCCCAGAAGACCAATTCTTGAGTTGCTCCCCCAAGAAGCCCAACTTGGAGCAAGAAATTCCCCCTCAAACTGTTAATGTTACTGTAACTGATGAACTGGGTACTCAACTTCTTGGAGGTAACTCTGAACCCCTTCAAGTTTCTGATCAACTTTCCACTACTCATGATACTAAAGCTGAGTTTCTTGCAACTGGGGATGAGTCTAATGAGAACCCCACTTCAGAGAATCAATTTGTTGGGTTTGATTCTGAGGAAAAGATTGAAAATTTTGAGTACCCATCTGTTGTTTATGATGTGAACAAGGGAAATGATGAAACTCCCCTCGAGGGTTTAAATCTTGGTGGTAACCATCAGTTTGTTGGGATTAATTCAGAGAAAAAGATTGAGGATTTTGAGTACCCATCTGAGAATAAGGGAACTGATGTGAATAAGGGAAATGATGAAACTTCCCTCAAGGGTTTGAATCTTGGTGGTATTACTGATAATTTGAATGAGAATTTTGGTGGGTTCTTGGGAAAATTGGTGAAGAATGATGGAATTACTGATAATGTGAATAATGGTGATGTTTTAACCACCTGTTCACTGAAGATTGAGGTGATTGATGGAACAGCTGTTGTTGATGTTTTCAACAATAATAATGGCAAGAAAAATAAGAGGGGTAAAAAGGGCAATCCTAGTACTAATGGTAAGGCTTCAAATGGTGGGAAAAGTAAGTTTATGTACTCAAGGAAAGATATGGAAGCTTTGAGGTTTGTGAATGTTAAAGGGCAGAAGAAGTTCTGGCAAAAGACATACTCTGGGTTTGAACAAACTGTTAAGAAAGAGTATGATGAGCTGGGTAGTTTTAATAAGCATCATCACAAGCATGGGGAGAATCGCCACCAAGCTCGTCACATGAGGAACATCTTCCATGGCCAAGGAATTCTGGGAGAATCATCTTCAGAAAATGTGAGTTGTGATGCTGAAATTAGTGGTTCCGCAGATTTTGTCTCTGATGGTGAGAACAGTGCCAAGCATGGTGATGCTTTAGTGGGTGAGTTGAGTGAATATGAAGAGAGTGATGATGATGACGAGAACATCCAAAAACCTGCTTTTTTGGTTGAAGGTGAACCAGATTTTGAATCTGGACCCCCAGAGGATGGTCTAGAATACCTTAGGCGTGTCAGGTGGGAAGCTAGGCAGATACCAAAGGTGAAAGTGGCCAAGATTGATAATAGTAAACTCAACAAGGAGCAGAGTGTTTACATGCCAAAGATTCCTGATATCGAGAAGTGCCCTCCACATCTTCTCCCACTGAAGCCGTGGGAAGATGAGTTTGTTGCAGATTTTAAAGAGTTGAGAATGGCATTACAGAGCCTAGACGATACCAGTGACGCAGAGACTGAAGACTCGCAAACAATTATTTTCAATCACTCAGCGCGTGCAAGCCGTTCTTCTAAGAGTTCGTTGTCACTTGAGTTACCATCAGGTGGTCCAACGTTAGCCTCAGTCCTGGAAATGGATCCAATGACTCGGGTTACAATGCTCAAAAGACGCGTAAGCTTGTTTGACAGTGCAAGTGATTTTTCGAAGGATGACTGTGCTTGGCTCTTTGCTCTTTGTGCTGTAATTGACATGCCCTTGGATGCTGACACTTCTGCATCTCTGCGTTGTCTACTTCGGAAGTGTGCCAAGTTACGTGCTGGAAAATCTGAAGTCGATGATGAGGTTGTAATACTGAATATTCTGGCAGCAATCTCGGGGAAGGTATTTGGGCAGTCAGAAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95642.p1 GENE.R_Transcript_95642~~R_Transcript_95642.p1 ORF type:complete len:652 (+),score=192.67,SIP1|PF04938.8|3.9e-71 R_Transcript_95642:72-1958(+)
MTEEFPGDSDTSSLSLKPTITISNNMNNNNQQPASVVDEIPEDQFLSCSPKKPNLEQEIPPQTVNVTVTDELGTQLLGGNSEPLQVSDQLSTTHDTKAEFLATGDESNENPTSENQFVGFDSEEKIENFEYPSVVYDVNKGNDETPLEGLNLGGNHQFVGINSEKKIEDFEYPSENKGTDVNKGNDETSLKGLNLGGITDNLNENFGGFLGKLVKNDGITDNVNNGDVLTTCSLKIEVIDGTAVVDVFNNNNGKKNKRGKKGNPSTNGKASNGGKSKFMYSRKDMEALRFVNVKGQKKFWQKTYSGFEQTVKKEYDELGSFNKHHHKHGENRHQARHMRNIFHGQGILGESSSENVSCDAEISGSADFVSDGENSAKHGDALVGELSEYEESDDDDENIQKPAFLVEGEPDFESGPPEDGLEYLRRVRWEARQIPKVKVAKIDNSKLNKEQSVYMPKIPDIEKCPPHLLPLKPWEDEFVADFKELRMALQSLDDTSDAETEDSQTIIFNHSARASRSSKSSLSLELPSGGPTLASVLEMDPMTRVTMLKRRVSLFDSASDFSKDDCAWLFALCAVIDMPLDADTSASLRCLLRKCAKLRAGKSEVDDEVVILNILAAISGKVFGQSEA*

Click here to download the sequence:
Link to NCBI Protein BLAST