Transcript Information: R_Transcript_95768.p1


Annotated TAIR IDAT5G59600.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24011315-24012919 | Reverse length=534
E-Value4E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3410600023395
Replicate 22.2411781343239
Replicate 33.5604105252447
Condition 2: 8 Hour
Replicate 12.7053671009129
Replicate 22.7218301866612
Replicate 34.4189314244388
Condition 3: 24 Hour
Replicate 15.6749635843763
Replicate 24.3367082088214
Replicate 35.4924202772364


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95768.p1 GENE.R_Transcript_95768~~R_Transcript_95768.p1 ORF type:complete len:534 (+),score=111.98,PPR_2|PF13041.2|5e+02,PPR_2|PF13041.2|6.4e-08,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|3.6e-08,PPR_2|PF13041.2|9e-09,PPR_2|PF13041.2|7.7,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|88,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|4.3,PPR|PF01535.16|0.72,PPR|PF01535.16|0.039,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|9.4e-06,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.4,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.045,PPR|PF01535.16|0.0033,PPR|PF01535.16|33,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|66,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|3.1e-07,PPR_1|PF12854.3|8.2e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.0009,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|0.00018,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.091,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|6.3e+03 R_Transcript_95768:283-1884(+)
ATGAGATTTTCATCAGTGTTTATGCCACTCAAGGTGTCATACAATGAACTCAGTTCAATATTACAAAGGTGCACCAAATTGAAAGCTTCAAAACCCGCTAAGCAAATTCATGGGATGCTAATTGCAAGTGGGTTTGATTTGGCCATCATGTCACTGGACGCTAAGCTCCTGGGTGTCTATGCAAGTTGTGGTAATCTGGCATATGCACACCAAATGTTTGATAAAATGCCTAGCCCAAATGTTTTCGCTTTGAATTGGATGATTTCAGCAATGGCATTTCATGGGCATTACCAGAAGGCACTTGAGTATTTTGCTTTGATTCAAAAGATGGGAAATTTACCCAATAAATATACTTTTGCGATGGTCTTAAAGGCTTGTATTGGTTTGTTGGATCTGAACAAGGGAAGAGAACTGCATGCTGTGATATATAAAATGGGTTTTGAATCTGATGTTTTGGTGTGTAATGCTTTGCTTGATATGTACAATAAATGTGCTAATATGGAGTATGCTCGTAGGCTGTTTGATAGAATGCCCAACAGAGATGTTGCATCTTGGACATCCATGATATCTGGGTACAGTAATGTAGGGAAGCTGCATGAGTCGATGGTCTTGTTTGGGCAGATGAAGTTGGAGGGGTTGGAGCCGAATGTTTTCACATGGAATGCAATTATGGCTGGGCATGCTCAGAGTGGGGATTGCAATGGAGCTCTCGAGTTTTTCTTGAGGATGACTAGAGAAGGAATGTTTCCTGACTTGGTTACTTGGAATGCCTTGATCTCTCGTTTTGCAAGGGGCAATAAACCGGCTGAGGCTTTGAAATTCTTCAGGGAGATGTTAGTTGTTGCTAAAATCCGACCTAATCATGTAACTCTAACGGGGCTGCTTCCGGTGTTTGGATTGATGGGCTCTATACAAAAAGGGAAAGAGCTTCATAGCTTGATATATAGATTAGGGCTTGAGTTCAATGTCTATGTGGCTAGTGCTCTTATTGACATGTACTCAAAATGTGGAAGTATTAAGGCTGCTAGAAGTGTATTTGAGGGGACTCTGATCCGGAATGTTGCAATATGGAATACTATAATTGGATGCCTTGGAAAGCATGGTGTAGTTGATGAGTCACTCCAGTTGTTTGAAACAATGCAGGAACAAGGTTTCCAGCCAAATGAAGTGACTTTAGTTTGTGTTCTTTCTGCTTGCAGCCAGGGTGGGTTAGTAGAGACGGGTATGGAAATCTTTAGGTCCATGGAGGATAAGTATGCTCTTTGTACCAACAAAGAGCACTATGCTTGTGTTGTTGACCTTTTATGCCGAGGTGGAAAGGTGGAAGAGGCTTATGAATTGGTGAAAAGAATGCCAATGGAACCTACAGAATCCATACTCGGGGCTTTCTTCAATGGGTGCAAAATCCACGAAAGAAGAGATCTTGCCAAACAAATGGTTGATGATCTCCTCAAAGCAGATTTGAAGAAGCCTGGGGCTTTTGTTACATTGTCAAATATATTTGCAGCTGAAGAGGAGTGGCAAGAAGTTGACAAGGTGAGGAAGTTGATGAAGGGCAAAGGGGTATACAAGAAGCCTGGCTTCAGCCTAGCCGACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95768.p1 GENE.R_Transcript_95768~~R_Transcript_95768.p1 ORF type:complete len:534 (+),score=111.98,PPR_2|PF13041.2|5e+02,PPR_2|PF13041.2|6.4e-08,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|3.6e-08,PPR_2|PF13041.2|9e-09,PPR_2|PF13041.2|7.7,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|88,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|1.2e+03,PPR|PF01535.16|4.3,PPR|PF01535.16|0.72,PPR|PF01535.16|0.039,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|9.4e-06,PPR|PF01535.16|5.3e+03,PPR|PF01535.16|0.4,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|0.045,PPR|PF01535.16|0.0033,PPR|PF01535.16|33,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|66,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|2e-05,PPR_1|PF12854.3|3.1e-07,PPR_1|PF12854.3|8.2e+02,PPR_1|PF12854.3|23,PPR_1|PF12854.3|0.0009,PPR_1|PF12854.3|2.4,PPR_1|PF12854.3|0.00018,PPR_3|PF13812.2|4.4e+03,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|64,PPR_3|PF13812.2|0.0082,PPR_3|PF13812.2|0.091,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|6.3e+03 R_Transcript_95768:283-1884(+)
MRFSSVFMPLKVSYNELSSILQRCTKLKASKPAKQIHGMLIASGFDLAIMSLDAKLLGVYASCGNLAYAHQMFDKMPSPNVFALNWMISAMAFHGHYQKALEYFALIQKMGNLPNKYTFAMVLKACIGLLDLNKGRELHAVIYKMGFESDVLVCNALLDMYNKCANMEYARRLFDRMPNRDVASWTSMISGYSNVGKLHESMVLFGQMKLEGLEPNVFTWNAIMAGHAQSGDCNGALEFFLRMTREGMFPDLVTWNALISRFARGNKPAEALKFFREMLVVAKIRPNHVTLTGLLPVFGLMGSIQKGKELHSLIYRLGLEFNVYVASALIDMYSKCGSIKAARSVFEGTLIRNVAIWNTIIGCLGKHGVVDESLQLFETMQEQGFQPNEVTLVCVLSACSQGGLVETGMEIFRSMEDKYALCTNKEHYACVVDLLCRGGKVEEAYELVKRMPMEPTESILGAFFNGCKIHERRDLAKQMVDDLLKADLKKPGAFVTLSNIFAAEEEWQEVDKVRKLMKGKGVYKKPGFSLADK*

Click here to download the sequence:
Link to NCBI Protein BLAST