Transcript Information: R_Transcript_95773.p1


Annotated TAIR IDAT5G05970.2
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)NEDD1
Annotation TypeOrtholog
Chromosome Positionchr5:1795464-1799313 | Forward length=782
E-Value1.7E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1858558306107
Replicate 23.773404439386
Replicate 34.2637701558949
Condition 2: 8 Hour
Replicate 13.8661892021966
Replicate 24.3630988958411
Replicate 35.3825700299222
Condition 3: 24 Hour
Replicate 16.6014747355658
Replicate 24.9263351052124
Replicate 36.9119067432307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_95773.p1 GENE.R_Transcript_95773~~R_Transcript_95773.p1 ORF type:complete len:779 (+),score=163.09,WD40|PF00400.28|8e+03,WD40|PF00400.28|1.4,WD40|PF00400.28|3,WD40|PF00400.28|0.17,WD40|PF00400.28|4.7e+03,WD40|PF00400.28|1e+03,WD40|PF00400.28|3.9e+03 R_Transcript_95773:247-2583(+)
ATGGCTTTACTGGCGGCGAGTGGTGGCGACACGGTCAAACTATTCGACGTATCAATTGAATCAGGCGATCCTTGCACGCTAAGTTACACCCCGTCTCCAGGTTTCCAAGTTAACTCCGTCAAGTGGAACCACACCAATTTGGTGGTTGCCAGTGCTGGGGACGATAAAAGGATTACATTGTGGCGTAAAAATGGGCAGAGTATGGGGACTATTCCTCCTTCCGGCTCCGATTCCGGTGACAACATTGAGGAGGCTATATCTTCAATTAACTTGAGCAACAAGACATCTAGATACTTGTGTTCTGGTGGTAGTGGTCAAGTTGTGAGAATTTGGGATCTGCAAAGGAAGCGTTGTATCAAATGGTTGAAAGGGCACACTGGTTCCATTTCAGGCGTGATGTACAATTGCAAAGATGAGCACTTAGCTTCTATTAGTGTAAATGGTGATCTCATTGTTCACAACCTTGCCTCTGGTGCAAGAGCTGCTGAATTGAAGGATCCTCATGAACAGGTGTTGAGAGCACTTGACTATTCTCGGGTTAGCCGGCATCTTTTGGCGACAGCTGGTGATGATGGATCTGTGCATATGTGGGATACGACCGGTAGAAGTCCCAAGGTATCGTGGTTGAAGCAACATTCAGCACCGACTGCTGATCTTAGTTTCTCCCCTTCCAATGATAAGATCATTGCTAGTGTTGGTCTGGATAAGAAGCTGTACACTTTTGACTGCGGTACAAGGAGGTCTTCATTTTGCATTTCTTATGAAGCACCATTTTCATCGTTAGCATACAGAGATGATGGATGGATATTGGCTGCTGGTACAAGTAATGGTCGCGTGGTATTTTATGATGTTCGTGGAAAACCTCAGCCTTTCACTGTTCTTCGTGCTTATGGTAATTCAGAGGCTGTTACAAGTTTATCTTGGCAGAGGTCAAAACCTATTGTGATAAATGAGAAAAATAGTACAGCTGAGGTTGCCCTCATAGGAGGGGCTGTTGAAGACTCAGTTTTGATGCCTGATCCACTTCCTTCAACAACTTCATCCAGTGTTTCACAAACCACAACACTGTCTGGTCCTCGGCGCACAAGTTCCGCTGTAGAACAGTCATCCTTCACTACAAGTGGTGAATCATTAACAAATTTGTCCTCTGCAGAGGAAACACCTCATAGAAGCTCACTTTGGGCAGGTGGGGTATTGCCAAGATTACATGCCACCCGAAGTTATAATTTCAAGGATGACATGGAGGTCTTTTCCCCGCTTGTGGATGTTCAGCCTATTACACCCTCACTTGATAAGCTCTGGAATGAGCCTGATGGATCTAGAAAAGATCAAGCTGGTGAAAAAAAGTCTTCACTGTTTCCCAATCGGAAATTCTCGATCACAGAAGGTGTCAATGATATACATCCAATATTCGACTGGAAACCCAGTTCAGCTTCTAAACAGGATGGCTCTAACTCTCCACTACCTGGATCCACTCCCAATGTGTTGTCCAAAATTGATGATTTGTCATCTATTACTCCTCCAGAAGCTTGGGGTGGTGAGAGGCTGCCAGATAAATTTGCTATTCATCGTCCAATGGGAACCTTGCCATCACGTTTTAGCATGTTATCTTTTGGTAGTACTTCAACTTCTATGTTCACTGGACTGCATGATCCATCTTCAGCAAGCCAGTACTCCACAAGTTTGAGTCTTCTTTCGGCAAATGTGCGAGCAAAAGACATCTCATCCGGTCAGGAAACTTCACCAGCAATCCCAGGACATGTTCCTTTTAGCTCTCTCCCTTTGAATATTGGGCCAAAATCTGCTGCCGGCTCGGGAAATCTGGAGTCTATTGGACCATCATCCTTGAATTTGTCTCGAAGATTCTCCACCTATGCTGAGAGGATAAGCACTTCCGCGTCATTTACTGATGTAGCTTCACCTCTGTTGAACTCACCAAAAACAAAGAAAACAGGAGCCGAGACCCGGGAAGAACTTCTCAACAGTCTGTTGTCAAGATCAGACCCAGCTAATGCTGCTGAACCTGGGTTGCCTCAACCTGCCAATGGAGGAGCGTCACCTCTGCACCAGAGAACATCTCAAGGTGATCTTCAGCAAGGAACCTCATCCTTCACCCTTCAGCTATTTCAACATACACTTGATGAAACTCTCGGATCCTTCCAAAAATCAATCCATGAAGATGTGAGGAACCTCCACATTGAAATTCTAAGGCAATTCCATATGCAGGAGATGGAAATGTCAACAGCTATGAATTCAGTCCTAGAAAACCAAGCTGCACTTATGAAAGAAGTTCAGGCTCTACGGAAAGAAAATGAACGGCTTCGCCAATTACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_95773.p1 GENE.R_Transcript_95773~~R_Transcript_95773.p1 ORF type:complete len:779 (+),score=163.09,WD40|PF00400.28|8e+03,WD40|PF00400.28|1.4,WD40|PF00400.28|3,WD40|PF00400.28|0.17,WD40|PF00400.28|4.7e+03,WD40|PF00400.28|1e+03,WD40|PF00400.28|3.9e+03 R_Transcript_95773:247-2583(+)
MALLAASGGDTVKLFDVSIESGDPCTLSYTPSPGFQVNSVKWNHTNLVVASAGDDKRITLWRKNGQSMGTIPPSGSDSGDNIEEAISSINLSNKTSRYLCSGGSGQVVRIWDLQRKRCIKWLKGHTGSISGVMYNCKDEHLASISVNGDLIVHNLASGARAAELKDPHEQVLRALDYSRVSRHLLATAGDDGSVHMWDTTGRSPKVSWLKQHSAPTADLSFSPSNDKIIASVGLDKKLYTFDCGTRRSSFCISYEAPFSSLAYRDDGWILAAGTSNGRVVFYDVRGKPQPFTVLRAYGNSEAVTSLSWQRSKPIVINEKNSTAEVALIGGAVEDSVLMPDPLPSTTSSSVSQTTTLSGPRRTSSAVEQSSFTTSGESLTNLSSAEETPHRSSLWAGGVLPRLHATRSYNFKDDMEVFSPLVDVQPITPSLDKLWNEPDGSRKDQAGEKKSSLFPNRKFSITEGVNDIHPIFDWKPSSASKQDGSNSPLPGSTPNVLSKIDDLSSITPPEAWGGERLPDKFAIHRPMGTLPSRFSMLSFGSTSTSMFTGLHDPSSASQYSTSLSLLSANVRAKDISSGQETSPAIPGHVPFSSLPLNIGPKSAAGSGNLESIGPSSLNLSRRFSTYAERISTSASFTDVASPLLNSPKTKKTGAETREELLNSLLSRSDPANAAEPGLPQPANGGASPLHQRTSQGDLQQGTSSFTLQLFQHTLDETLGSFQKSIHEDVRNLHIEILRQFHMQEMEMSTAMNSVLENQAALMKEVQALRKENERLRQLL*

Click here to download the sequence:
Link to NCBI Protein BLAST