Transcript Information: R_Transcript_96076.p2


Annotated TAIR IDAT5G42765.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17150505-17151641 | Reverse length=229
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2920473752755
Replicate 21.1757928233127
Replicate 30.36650780153844
Condition 2: 8 Hour
Replicate 10
Replicate 20.35777410945897
Replicate 30.1452128849631
Condition 3: 24 Hour
Replicate 10.18366245782163
Replicate 20.17644207112462
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96076.p2 GENE.R_Transcript_96076~~R_Transcript_96076.p2 ORF type:3prime_partial len:125 (-),score=11.13 R_Transcript_96076:2-373(-)
ATGCATCCCTTGATCCCTTGTTCAAATTTTTCAAGGGAAGATAATGCGTCCATCAAAGCATCTGCAATCTTCTCTCTATCGGACACAATTTCAATCTTTGCTTCCTTGGCCAAACCAATGAGAATGGCGAATGACCTTGTAAGCTCACTCAGCATGGCTTCAGCTGCCATCTTCTTTGTATCACTATCATCAAGTAATGAAGATGCATTCTTCACAATCAGTTTGAATGTGCAAACCGTAGGTCCATGTGATTGTCCTTTACTCTTATCCTTTCCTCCTTCATCTTCTTTTTCTATAAATCTATTAGGAAGAAAACACAAACTCTCCCCCTCTCTCCTCAAAATCAGCTTCTATAGTGGTATAATACTCCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96076.p2 GENE.R_Transcript_96076~~R_Transcript_96076.p2 ORF type:3prime_partial len:125 (-),score=11.13 R_Transcript_96076:2-373(-)
MHPLIPCSNFSREDNASIKASAIFSLSDTISIFASLAKPMRMANDLVSSLSMASAAIFFVSLSSSNEDAFFTISLNVQTVGPCDCPLLLSFPPSSSFSINLLGRKHKLSPSLLKISFYSGIILR

Click here to download the sequence:
Link to NCBI Protein BLAST