Transcript Information: R_Transcript_96102.p1


Annotated TAIR IDAT5G51140.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20784103-20786793 | Reverse length=410
E-Value2.7E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2018410505165
Replicate 20.86404528462132
Replicate 31.2254633281892
Condition 2: 8 Hour
Replicate 11.0076487632611
Replicate 21.3803013482213
Replicate 31.7927516662111
Condition 3: 24 Hour
Replicate 11.3226720213492
Replicate 20.9076238226575
Replicate 31.981602893464


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96102.p1 GENE.R_Transcript_96102~~R_Transcript_96102.p1 ORF type:complete len:243 (+),score=27.27,PseudoU_synth_2|PF00849.18|7.9e+03,PseudoU_synth_2|PF00849.18|7.9e-16 R_Transcript_96102:105-731(+)
ATGGACATTGTTTGGCAAACCCCAGCTAATCCTCCCCTTCGCGAAGACTACATCCTCCACAAAGGAAGGCGCTATGTACGGCCTTATTACTTCGAGTTCATCTGCTATGTGAAAAATCGTTGGTCTGGTAAAACTATAGTTGATTTATTCGCTGACGAATTCAAAGGCCGGCCCTATGATTACTATGTTACAGCTGTCAAATGTGGGAGAATACAGGTTGATGGACAAAATGTTTCTGTTCACTATAGAGTGAAACCGACACAAAAAATAAGCCACTTTGTCCACAGGCATGAACCACCGGTAATGGCCTGGGATGTCTCGATTCTGCAGAAAGAACCTGAAGTGCTGACTGTCTGCAAGCCGGCTTCTGTTCCTGTGCATCCTTGCGGTCAATACCGGAAGAACACGATCCTGGGAATTCTCGAAGCAGAGTATGGTTTAACACCACTATTCCCTATACATAGATTGGATCGTCTGGTCTCTGGACTCCTGATATTGGCGAGGAATGCTTGCAAGGCTGATAAGTTCAGGCAACAGATTGAAGCAGGACTGGTGAAGAAACAGTACATTGCAAAGGTTGTTGGGGTTTTTCCTGAGGCAAGTTGTGGACTTGAACATAAATTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96102.p1 GENE.R_Transcript_96102~~R_Transcript_96102.p1 ORF type:complete len:243 (+),score=27.27,PseudoU_synth_2|PF00849.18|7.9e+03,PseudoU_synth_2|PF00849.18|7.9e-16 R_Transcript_96102:105-731(+)
MDIVWQTPANPPLREDYILHKGRRYVRPYYFEFICYVKNRWSGKTIVDLFADEFKGRPYDYYVTAVKCGRIQVDGQNVSVHYRVKPTQKISHFVHRHEPPVMAWDVSILQKEPEVLTVCKPASVPVHPCGQYRKNTILGILEAEYGLTPLFPIHRLDRLVSGLLILARNACKADKFRQQIEAGLVKKQYIAKVVGVFPEASCGLEHKL*

Click here to download the sequence:
Link to NCBI Protein BLAST