Transcript Information: R_Transcript_96120.p1


Annotated TAIR IDAT5G05450.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1612077-1615195 | Forward length=593
E-Value7.5E-294
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3183326381719
Replicate 23.8116360755741
Replicate 34.863276597337
Condition 2: 8 Hour
Replicate 15.8766075873389
Replicate 26.9490740491069
Replicate 37.2606442481548
Condition 3: 24 Hour
Replicate 17.8409741608466
Replicate 26.6505088346971
Replicate 39.2265093603229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96120.p1 GENE.R_Transcript_96120~~R_Transcript_96120.p1 ORF type:complete len:650 (+),score=139.98,DEAD|PF00270.25|6.6e-43,Helicase_C|PF00271.27|8.2e+03,Helicase_C|PF00271.27|6e-23,DUF4217|PF13959.2|5.1e-20,ResIII|PF04851.11|3.6e-07,ResIII|PF04851.11|5.5e+03 R_Transcript_96120:165-1952(+)
ATGGCGGCGACGGGGGAAGAAGTAGACTCCAGCAACCCAAACAGAGCCTTAACCAACACTCGGTTCTCCGACCTGAAACCGGCACTCTCAGAGCCTGTCCTCGCAGCGTTGGACCGTGGCGGTTTTCACTACTGCACCCCGGTTCAAGCCGCCACCATTCCTTTACTGAGTAACCACAAGGATGTAGCTGTGGACGCCGCCACCGGTTCAGGAAAAACCCTAGCTTTCATCCTTCCCCTTGTCGAGATTCTTCGCCGCTCTTCTTCCTCTCCTAAACCCCACCAAGTGCTGGGTTTGATTATCTCGCCGACTAGAGAGTTGTCGTCTCAAATATATAATGTTGCCCTGCCTTTTATATCGACCCTAGCGAATGTGAAGCCCATCCTTCTCGTCGGAGGAGTGGAAGTCAATACAGATGTTAAAAAGGTAGAGGAGGAAGGAGCAAATGTCTTGATTGGGACTCCTGGGCGGTTAGATGACATCATGAAACGTGATATCTTGGACTTTCGAAGCTTCGAGGTTTTGATTTTAGACGAGGCTGACAGGCTTTTGGATATGGGGTTCCAAAAGCAGATAAATTCAATTATTGAACACTTACCAAAGATTAGGAGAACTGGGCTTTTTTCAGCTACACAAACTGAGGCTGTTAAGGAACTTTCTAAAGCTGGATTAAGGAACCCGGTGAAAGTCGAAGTTCGAGCAGAAACAAAATCATCAGACGATCCCTCTGTGATACCCTCGACTTCAAAAACACCTTCGGGCCTGCATCTTGAGTATCTGGAGTGTGAGGCAGATAAGAAATCATCAGAACTAGTTGACCTTCTTGTCAAATACAAATCGAAAAAAATTATCATCTACTTTATGACGTGTGCTTGTGTTGATTACTGGGGAGTTGTTCTTCCACAACTTGCTGTTCTGAAGGGCCATTCACTAGTTCCTCTTCATGGGAAGATGAAACAAAAAGCTAGGGAGAAAGCGCTAGCTACATTTACAGGTCTTTCTAGTGGAGTTCTTCTTTGTACCGACGTTGCTGCTCGTGGATTAGACATACCTGGTGTTGACTGCATTTTGCAGTATGACCCTCCGCAAGATCCAAATGTTTTTATTCATCGAGTTGGAAGAACTGCTCGCATGGGGAAACAGGGAAGTGCAATTGTTTTCCTATTGCCAAAGGAGGAAGCTTATGTCGAATTTCTGCGGATAAGGAGGGTTCCTCTTCAGGAAAGGAAGTGCTCTGATACTGCTGCTGATATCATTCCCCAGATAAGGTCTTCTGCAAAAAAGGACCGTGATGTTATGGAGAAAGGACTGAAAGCCTTTGTCTCTTTGATTCGTGCATATAAGGAGCATCATTGCTCCTACATTTTCAGGTGGAAAGAGCTGGAGATTGGAAAGTTGGCCATGGGATTTGGGTTATTGCAGCTTCCTTCAATGCCGGAGGTGAAGCATCACTCTCTCTCAACAGAGGGTTTCACTCCAGCTGAAGATGTGAAGATGGAGGAGATCAAGTACAAGAACAAAGCTCGTGAGAAGCAAAGGAAAAAGAAGTTGCTAGCTATAAAATCTGAAGAAGAACAAAATCCAAAACCAAAGAGATCCAAGCCAGCTCCAAATCAGAAGACCACAGCAATGAAGAAGCAAACAGCAAAGCAGAGACGTGCTGTTCAGACTAAAGAGGATGAAGATGATTTGGCTCGGGAGTATCGTTTACTTAAGAAGTTGAAAAGAGGGGCTATTGATGAGGATGAATATGCACGATTAATGGGTGCTGAGGAGTTGCTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96120.p1 GENE.R_Transcript_96120~~R_Transcript_96120.p1 ORF type:complete len:650 (+),score=139.98,DEAD|PF00270.25|6.6e-43,Helicase_C|PF00271.27|8.2e+03,Helicase_C|PF00271.27|6e-23,DUF4217|PF13959.2|5.1e-20,ResIII|PF04851.11|3.6e-07,ResIII|PF04851.11|5.5e+03 R_Transcript_96120:165-1952(+)
MAATGEEVDSSNPNRALTNTRFSDLKPALSEPVLAALDRGGFHYCTPVQAATIPLLSNHKDVAVDAATGSGKTLAFILPLVEILRRSSSSPKPHQVLGLIISPTRELSSQIYNVALPFISTLANVKPILLVGGVEVNTDVKKVEEEGANVLIGTPGRLDDIMKRDILDFRSFEVLILDEADRLLDMGFQKQINSIIEHLPKIRRTGLFSATQTEAVKELSKAGLRNPVKVEVRAETKSSDDPSVIPSTSKTPSGLHLEYLECEADKKSSELVDLLVKYKSKKIIIYFMTCACVDYWGVVLPQLAVLKGHSLVPLHGKMKQKAREKALATFTGLSSGVLLCTDVAARGLDIPGVDCILQYDPPQDPNVFIHRVGRTARMGKQGSAIVFLLPKEEAYVEFLRIRRVPLQERKCSDTAADIIPQIRSSAKKDRDVMEKGLKAFVSLIRAYKEHHCSYIFRWKELEIGKLAMGFGLLQLPSMPEVKHHSLSTEGFTPAEDVKMEEIKYKNKAREKQRKKKLLAIKSEEEQNPKPKRSKPAPNQKTTAMKKQTAKQRRAVQTKEDEDDLAREYRLLKKLKRGAIDEDEYARLMGAEELLD*

Click here to download the sequence:
Link to NCBI Protein BLAST