Transcript Information: R_Transcript_96288.p1


Annotated TAIR IDAT1G11330.2
Annotated Gene NameS-locus lectin protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3810372-3813416 | Forward length=842
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.476486274432
Replicate 29.3122711715567
Replicate 310.513675044132
Condition 2: 8 Hour
Replicate 112.868908806995
Replicate 213.958933372916
Replicate 313.252186588487
Condition 3: 24 Hour
Replicate 17.2067314008488
Replicate 26.5824851147859
Replicate 37.0529940192023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96288.p1 GENE.R_Transcript_96288~~R_Transcript_96288.p1 ORF type:complete len:841 (+),score=102.69,Pkinase_Tyr|PF07714.13|2.3e+03,Pkinase_Tyr|PF07714.13|3.9e-50,Pkinase|PF00069.21|1.9e-46,S_locus_glycop|PF00954.16|5.3e-27,B_lectin|PF01453.20|8.9e-25,PAN_2|PF08276.7|1.3e-15 R_Transcript_96288:229-2751(+)
ATGGCTCTATTTCACTCGTTCCTTCTTCTGTTGTCATGGTTAAGTACCTTATCCAAAGCCATAGACAAATTTACGACAACTGAATTCCTTAGTGACCTTGATTCTATAATTTCGAATAATGGCCAGTACAAGCTTGGATTCTTTAGTCCCCCTAACACCAACAATCGTTATATTGGAATTTGGTACAATCAGGTCTCAGCAACAGATGTCTTCTGGGTAGCAAATCGAAATAACCCAGTTACTGATTCTTCTGGTGTCTTGAAAATAGCTGAAGATGGCAATCTCCAGGTTTTGAATGGACGAAAGGACATCCTTTGGTCAACCAACATATCTGTTCCTAATGCTATAAATACTTCCGTATCTGCAAAGCTTTTAGATATTGGAAATCTCATCTTGATTGCATACGACACCAATGGTGAGTCCAGTACCAATGGAACTATCCTATGGCAAAGTTTTGATCACCCTGTAGACTCAATTTTGCCAAACACGATATTGGCCTTTACAAAATCCAATATGAAGCAAGCTTTGAGACCCTGGAAAAGTCCTGAAGATCCTTCATATGGGATATTCTCACTTGGAACCGATTCTTTTTCTCATCCTCAAGTTGTTATTTGGAAAGATGATCATTATCAACCACATTGGCGTAGTGGTCCTTGGAATGGTAATATATTTTTGGGATTGTTGTATGCTGATGCAGCTACTAACTATGCTAATACCCGCATTCAAAATGACAAGGAAGGCGCAATTGATTTGGCCTACTCTGGTGCAAGTACGCTGGCTTTTTCACACTATGAGTTTAGCTATAATGGAACAATAAGCGAGAAATATTGGGATGGAGATAAGGGTAAATGGCAGTTTGTGTGGCAAGCCCCACAAACTACATGTGATCTTTATGGTAATTGTGGAGCATTTGGAACTTGTCACACTTTACGTTCTCCAGTTTGTCAATGTTTGAAGGGCTTCATGCCTAAGAATGCGGAAGAATGGAGAAAAGGTGATTGGTCTAGTGGTTGTGTACGAGCATTACCATTGCAATGTGGCATTCAAGGTAGCAAAGAAGATGGCTTTTTAACACTAAAGAATGTTAAAGTGCCAGATCATGCAGAATGGTATGTTGGATTGAATCAAGTAGATTGTAGAAACCACTGCTTGAAAAATTGTTCTTGTCTATGTTATGCTTATGATGCTGGTGCTGGGTGCATGCACTGGAGCAAAGACTTAATTGACATTCAAGAATTCCCTTTTGGTGGAGTGGATCTTTATCTTCGTCTTCCATATTCGGAGCTTAGTAAAATGCCTTCTTACCTTTTTTTCCCATTTTTAAAAAGTAAGAAAAGCAACAAAAATGTTGTTATTGCAGTTCCAGTTATCCTAGGCACAATTGCGATTGTCATTTTAATATACTTCTTATGGAGATGGATAACTCAAAAAAGAGGTAAGAAGGTTGAAAATAAGAAGAAACTATTGGATATTGTGACGCATGATACTAGGAATCAAGTACAACTTGAAGATCTAGCATTATTTAAATTGCAAACAATTGCAACTGCAACGAATAATTTTCAAGATAAGAACAAATTAGGTCAAGGTGGTTTTGGTCCAGTTTACAAGGGAAAATTGGAAGATGGGCAAGACATTGCAGTAAAAAGACTTTCTACTGTTTCAGGACAAGGGCTAGAAGAGTTCATGAATGAAGTGGTGGTTATTTCGAAACTCCAACATAGAAAACTTGTAAAACTTTTGGGTTGTTGCGTAGAAAGAGAGGAAAAAATCCTGATTTATGAGTTCATGCCTAACAAGAGCTTGGACTCCTTTTTATTTGATCCATTCAAACGAGAATGTCTTAATTGGGATAGGAGGTTTAACATTATCGAAGGCATATGTCGAGGGCTTGTTTATCTCCACAGAGATTCTCGATTGAGAATTATCCACAGAGATCTTAAGGCAAGTAATATTTTATTGGATGAAGATCTGAATCCCAAAATCTCAGACTTTGGCATGGCTCGAATCTTCAACCACAAACAGGATCAAGATAATACTAGAAGGGTAGTTGGAACATATGGGTATATGTCTCCTGAGTATGCAATGGAAGGTCACTTTTCTGAAAAATCAGACGTATTCAGCTTTGGTGTGCTATTGATAGAGATTGTGACTGGAAAGAAGAACAGTATATTTTGGTTTGAAGAGAACTCGTTAACCCTAATAGGATATGTATGGAAATTGTGGAATGAGAATGCAATTGCATCAATAATTGATCCATTAGTTCGTGATCCAACAATCCAGCCACAAGTTTTGCGGTGCATACAGGTGGGGCTATTGTGTGTTCAAGAATATGCAAGAGATAGGCCAAATACTTCTACTGTCTTATCAATGATAGTTAATGATATTGTTGATCTTCCATGCCCAAAGGAACCGGGGTTTAAAAGACGGTTAATATCTTCAGACACCGATTCCTCCCAATTAATTGGCCAACAGAGTTCCTCGATGAGTCATACTATCTCAGTTAGTGAAGTGATTGGCCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96288.p1 GENE.R_Transcript_96288~~R_Transcript_96288.p1 ORF type:complete len:841 (+),score=102.69,Pkinase_Tyr|PF07714.13|2.3e+03,Pkinase_Tyr|PF07714.13|3.9e-50,Pkinase|PF00069.21|1.9e-46,S_locus_glycop|PF00954.16|5.3e-27,B_lectin|PF01453.20|8.9e-25,PAN_2|PF08276.7|1.3e-15 R_Transcript_96288:229-2751(+)
MALFHSFLLLLSWLSTLSKAIDKFTTTEFLSDLDSIISNNGQYKLGFFSPPNTNNRYIGIWYNQVSATDVFWVANRNNPVTDSSGVLKIAEDGNLQVLNGRKDILWSTNISVPNAINTSVSAKLLDIGNLILIAYDTNGESSTNGTILWQSFDHPVDSILPNTILAFTKSNMKQALRPWKSPEDPSYGIFSLGTDSFSHPQVVIWKDDHYQPHWRSGPWNGNIFLGLLYADAATNYANTRIQNDKEGAIDLAYSGASTLAFSHYEFSYNGTISEKYWDGDKGKWQFVWQAPQTTCDLYGNCGAFGTCHTLRSPVCQCLKGFMPKNAEEWRKGDWSSGCVRALPLQCGIQGSKEDGFLTLKNVKVPDHAEWYVGLNQVDCRNHCLKNCSCLCYAYDAGAGCMHWSKDLIDIQEFPFGGVDLYLRLPYSELSKMPSYLFFPFLKSKKSNKNVVIAVPVILGTIAIVILIYFLWRWITQKRGKKVENKKKLLDIVTHDTRNQVQLEDLALFKLQTIATATNNFQDKNKLGQGGFGPVYKGKLEDGQDIAVKRLSTVSGQGLEEFMNEVVVISKLQHRKLVKLLGCCVEREEKILIYEFMPNKSLDSFLFDPFKRECLNWDRRFNIIEGICRGLVYLHRDSRLRIIHRDLKASNILLDEDLNPKISDFGMARIFNHKQDQDNTRRVVGTYGYMSPEYAMEGHFSEKSDVFSFGVLLIEIVTGKKNSIFWFEENSLTLIGYVWKLWNENAIASIIDPLVRDPTIQPQVLRCIQVGLLCVQEYARDRPNTSTVLSMIVNDIVDLPCPKEPGFKRRLISSDTDSSQLIGQQSSSMSHTISVSEVIGR*

Click here to download the sequence:
Link to NCBI Protein BLAST