Transcript Information: R_Transcript_96321.p1


Annotated TAIR IDAT1G49040.1
Annotated Gene Namestomatal cytokinesis defective / SCD1 protein (SCD1)
Annotated Gene Symbol(s)SCD1
Annotation TypeHomolog
Chromosome Positionchr1:18139419-18148826 | Reverse length=1187
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7379441432078
Replicate 23.5693710707707
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 13.1219477807738
Replicate 23.130523457766
Replicate 32.5866045134051
Condition 3: 24 Hour
Replicate 14.189799819056
Replicate 22.9223218030015
Replicate 31.9698934218208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96321.p1 GENE.R_Transcript_96321~~R_Transcript_96321.p1 ORF type:complete len:400 (+),score=85.86,WD40|PF00400.28|0.004,WD40|PF00400.28|1.7e-06,WD40|PF00400.28|0.57,WD40|PF00400.28|90,WD40|PF00400.28|6.1 R_Transcript_96321:399-1598(+)
ATGGTTGCAGATTTCTGCACTGATGCTAGACCTTTCAGCCATGTATTGTTTGACAAAGGCAATATCATTTTCTCTCAGGGATCACTGATTCAAATTCTGAAGATTGACAGCTTTATTAACGGCAAGGAGTGCCATGCTGCTTTAAGGGATCACAATGCAAGAATTACTTGTATGAGATTGTTCCCACTCAATGAAGCATATTTTATAAGAAGTGAGAGCCAAAGTGATGAGAATTTATTGGCAACCTCGAGTTCTGATCGCTCCATTCGTCTTTGGTGCAAGGGTTCTTGTGTCCGATGTTTGAGAGGTCATAGTGGCCCTGTTTCCACACTCTCAGATAAATTATTGGGTGATACGGGTAACAAGGTACTTGCTAGTGGAGGGGAAGATGGAACAGTTCGTTTGTGGTCGCTCAGCTCCAGTGGCAGATGTGGCCAGCATGCTCTGAATGCGACACTACATGGGCATGAAAAACCTATCAAGTTAATATCAGTTGCTGGGCATAAAACTTCACTTTTGGTCAGTATTGCAACTGATTCTAAGATCAGAGTGTGGGACTCAAACCTGGCATCTGCATTTAAGGCATCAAGTTGTGTGGGAATGGCTTCTGTGCCTGGTGCTCCTATTGGAATGAAATGCTTTGAATCCATGTTCTATGTGGCTGCCGGTTCATCAGTTCATGCAATTGATTTGAGAATTATGAAGAAAGCCTTTAGTGCTGCTGTTTGTCTGCCAAATCTTTACTCATTTGTGGTGCTACCCTCCAGGTCTTTAATCTGTACTGGTGGGAATAAAAGAGCCCTGCTTTGGGATATTAGGAAGAGCCAAGAGGAACTGAAACCAGAGCCAATGGCTGAGCTGGAGGGTCACCATGGTCCTGTTAAGCACATTCATATGGATCCATACAAGATAGTTACTGGGGGTCCTGATGACTTTTATGCTAATATTTGGGATGTAGAAACTGGTTCTCTCAGAAATTCATTGAATTGTTGTGACTCAGAACTATCAAACGCTAGCACAGGCTGTAATGCAATGGCAGTTGATGGGTGTCGAATTGCCACAACAAGCTGTGGTGAGGAAGGACTTTTACGCTTTAGGGACTTTACTAATGCTTCTTGTTCTGTTTCTTGCTACGAGGATGAAGTTGCTTCGAAGTTCTGGAATTCAAAGTCCTACAGTGATTCAGATCCTGATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96321.p1 GENE.R_Transcript_96321~~R_Transcript_96321.p1 ORF type:complete len:400 (+),score=85.86,WD40|PF00400.28|0.004,WD40|PF00400.28|1.7e-06,WD40|PF00400.28|0.57,WD40|PF00400.28|90,WD40|PF00400.28|6.1 R_Transcript_96321:399-1598(+)
MVADFCTDARPFSHVLFDKGNIIFSQGSLIQILKIDSFINGKECHAALRDHNARITCMRLFPLNEAYFIRSESQSDENLLATSSSDRSIRLWCKGSCVRCLRGHSGPVSTLSDKLLGDTGNKVLASGGEDGTVRLWSLSSSGRCGQHALNATLHGHEKPIKLISVAGHKTSLLVSIATDSKIRVWDSNLASAFKASSCVGMASVPGAPIGMKCFESMFYVAAGSSVHAIDLRIMKKAFSAAVCLPNLYSFVVLPSRSLICTGGNKRALLWDIRKSQEELKPEPMAELEGHHGPVKHIHMDPYKIVTGGPDDFYANIWDVETGSLRNSLNCCDSELSNASTGCNAMAVDGCRIATTSCGEEGLLRFRDFTNASCSVSCYEDEVASKFWNSKSYSDSDPDV*

Click here to download the sequence:
Link to NCBI Protein BLAST