Transcript Information: R_Transcript_96352.p1


Annotated TAIR IDAT3G18430.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6326180-6327476 | Forward length=175
E-Value3.3E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 178.301054095526
Replicate 269.430947967531
Replicate 381.735404604453
Condition 2: 8 Hour
Replicate 156.623562690504
Replicate 268.607251103638
Replicate 377.144345136645
Condition 3: 24 Hour
Replicate 182.700282854343
Replicate 278.82248773962
Replicate 385.187941537072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96352.p1 GENE.R_Transcript_96352~~R_Transcript_96352.p1 ORF type:complete len:176 (+),score=38.68,EF-hand_7|PF13499.2|0.42,EF-hand_7|PF13499.2|1.3e-09,EF-hand_6|PF13405.2|0.015,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|7.7e+02,EF-hand_1|PF00036.28|0.024,EF-hand_1|PF00036.28|4.1e+02,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|8.1e+03,EF-hand_8|PF13833.2|6.3,EF-hand_8|PF13833.2|0.0003,EF-hand_8|PF13833.2|6.6e+03,EF-hand_5|PF13202.2|0.04,EF-hand_5|PF13202.2|0.09 R_Transcript_96352:634-1161(+)
ATGGGTAATGCTCCATCAATCCTTACTCAGTATGATATTGAAGAAGTTCAAGAGCACTGCAATAGATTATTTACTCAGCAAGAAATAGTGTCATTGTATCAAAGATTTTGTCAACTTGACCGGAATGCCAAAGGGTTTATTTCGGCTGATGAATTCATGTCTGTTCCAGAATTTGCAATGAACCCATTAGCTCAGAGATTGTTGAAAATGGTGGATGGTTTGAATTTTAAGGATTTTGTTGCCTTCCTTTCCGCATTTAGTGCAAAAGCCAGCCTTGAACAGAAAGTTTCACTTATTTTCAAGGTTTATGATTCCGATGGCAATGGAAAGGTGACCTTCGATGACATATTAGAAGTATTACGCGACTTGACAGGTTCATTCATGTCTGATAAGCAAAGAGAGGAGGTTTTGACACAGTTGTTGCAGGAAGCTGGCTATACAAGAGATTCTTATTTGGTGTTGGATGATTTTGTCAAGATTTTTTCAAATTCAGGAATGAAAATGGAGGTAGAAGTTCCAGTTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96352.p1 GENE.R_Transcript_96352~~R_Transcript_96352.p1 ORF type:complete len:176 (+),score=38.68,EF-hand_7|PF13499.2|0.42,EF-hand_7|PF13499.2|1.3e-09,EF-hand_6|PF13405.2|0.015,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|1.3e-05,EF-hand_6|PF13405.2|7.7e+02,EF-hand_1|PF00036.28|0.024,EF-hand_1|PF00036.28|4.1e+02,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|8.1e+03,EF-hand_8|PF13833.2|6.3,EF-hand_8|PF13833.2|0.0003,EF-hand_8|PF13833.2|6.6e+03,EF-hand_5|PF13202.2|0.04,EF-hand_5|PF13202.2|0.09 R_Transcript_96352:634-1161(+)
MGNAPSILTQYDIEEVQEHCNRLFTQQEIVSLYQRFCQLDRNAKGFISADEFMSVPEFAMNPLAQRLLKMVDGLNFKDFVAFLSAFSAKASLEQKVSLIFKVYDSDGNGKVTFDDILEVLRDLTGSFMSDKQREEVLTQLLQEAGYTRDSYLVLDDFVKIFSNSGMKMEVEVPVD*

Click here to download the sequence:
Link to NCBI Protein BLAST