Transcript Information: R_Transcript_96396.p1


Annotated TAIR IDAT4G25420.1
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)GA5, GA20OX1, AT2301, ATGA20OX1
Annotation TypeOrtholog
Chromosome Positionchr4:12990982-12992409 | Reverse length=377
E-Value4.6E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.8537835488199
Replicate 24.6958306843649
Replicate 34.7108971920108
Condition 2: 8 Hour
Replicate 12.6437180662835
Replicate 23.6214281645108
Replicate 33.079707714513
Condition 3: 24 Hour
Replicate 13.3049799608006
Replicate 21.9277090032895
Replicate 36.0205254537224


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96396.p1 GENE.R_Transcript_96396~~R_Transcript_96396.p1 ORF type:complete len:389 (+),score=62.83,2OG-FeII_Oxy|PF03171.16|4.7e-30,DIOX_N|PF14226.2|2.4e-25 R_Transcript_96396:103-1269(+)
ATGGCTATTGAGTGCATGAGAAACATATCTTCTATGCCTTCAAAAACCTACAAACAACCCAAAGATGTCCAAATTAACAACAACAATAATATTCATAGTCAACCTCTTGTTTTTGATCCCTCATTTCTTAACAACCAATCCATTATACCCCAACAATTCATATGGCCCGACGATGAGAAGCCATGTTCCAATTCTAACCTTGAGGAACTCCAGGTTCCCCTTATCGACCTGCAAGGTTTCCTGTCAGGAAACCCTGAGGCGACCTTGGAGGCCTCTAAGCTCATCCGTGAAGCCTGTCTTAAGCATGGCTTCTTCCTAGTCACCAACCATGGTGTTGATACTAAGTTGATCAAAGATGCCCATAATGTCATGGATGACTTCTTTGATCGACCTCTGGCTCAGAAGCAGAAAGCTCAAAGGAAACTTGGAGAGCATTGTGGCTATGCTAGTAGCTTTACTGGTAGATTCTCCTCCAAGCTGCCTTGGAAGGAGACTCTCTCCTTCCAATACTCTCCTGACCACGACTCTATTGTTCAAGATTACTTCAACAACAGAGTTGGTGACGACTTAGAACACTTGGGGAAGGTTTACCAAGAGTATTGTGATGCGATGAGCAAACTTTCATTAGGAATCATGGAGCTACTTGGCTTAAGTCTTGGAGTAGGGAAAAAGTGTTTCAGAGAATTCTTTCAAGGGCATGATTCGGTGATGCGACTCAACTATTATCCACCATGTAAAAGGCCTGATCTTACCCTAGGAACTGGCCCTCATTGTGATCCTACTTCATTAACCATCCTTCACCAAGACCAAGTGGGTGGCCTTCAAGTTTATGCCGATGGAAAGTGGCGTTCCATTTCCCCCAATTTTAATGCTTTTGTCATTAACATTGGTGACACTTTTATGGCTCTAGCAAATGGAAGGTACAAGAGTTGCTTGCATAGAGCAGTGGTGAATAGCGAGAAGTCAAGGAAATCACTAGCATTTTTTCTATGTCCAGGCAAGGATAAAGTGGTGAAGCCACCATATGAACTTGTGGATAGTGAAAATCCAAGGAAGTATCCAGATTTTGTGTGGCCAATGCTACTAGAATTCACACAAAAGCACTATAGAGCTGATATGAATACGTTAAACGCCTTCTCAGAATGGGTTCACCATCAAAGAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96396.p1 GENE.R_Transcript_96396~~R_Transcript_96396.p1 ORF type:complete len:389 (+),score=62.83,2OG-FeII_Oxy|PF03171.16|4.7e-30,DIOX_N|PF14226.2|2.4e-25 R_Transcript_96396:103-1269(+)
MAIECMRNISSMPSKTYKQPKDVQINNNNNIHSQPLVFDPSFLNNQSIIPQQFIWPDDEKPCSNSNLEELQVPLIDLQGFLSGNPEATLEASKLIREACLKHGFFLVTNHGVDTKLIKDAHNVMDDFFDRPLAQKQKAQRKLGEHCGYASSFTGRFSSKLPWKETLSFQYSPDHDSIVQDYFNNRVGDDLEHLGKVYQEYCDAMSKLSLGIMELLGLSLGVGKKCFREFFQGHDSVMRLNYYPPCKRPDLTLGTGPHCDPTSLTILHQDQVGGLQVYADGKWRSISPNFNAFVINIGDTFMALANGRYKSCLHRAVVNSEKSRKSLAFFLCPGKDKVVKPPYELVDSENPRKYPDFVWPMLLEFTQKHYRADMNTLNAFSEWVHHQRA*

Click here to download the sequence:
Link to NCBI Protein BLAST