Transcript Information: R_Transcript_96397.p1


Annotated TAIR IDAT4G25420.1
Annotated Gene Name2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Annotated Gene Symbol(s)GA5, GA20OX1, AT2301, ATGA20OX1
Annotation TypeOrtholog
Chromosome Positionchr4:12990982-12992409 | Reverse length=377
E-Value2.8E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2367169134821
Replicate 21.2207151404824
Replicate 31.6647338369297
Condition 2: 8 Hour
Replicate 11.0676975994438
Replicate 20.71502819841
Replicate 31.5829892982896
Condition 3: 24 Hour
Replicate 11.7351831044195
Replicate 20.64114124681911
Replicate 31.2725409701685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96397.p1 GENE.R_Transcript_96397~~R_Transcript_96397.p1 ORF type:complete len:344 (+),score=47.08,DIOX_N|PF14226.2|8.2e-26,2OG-FeII_Oxy|PF03171.16|2.5e-20 R_Transcript_96397:103-1134(+)
ATGGCTATTGAGTGCATGAGAAACATATCTCCTATGCCTCCAATAACCTACAAACAACCCCAAGATGACCAAAGTAACAACAACAATAATAATCATACTCAACCTCTTGTCTTTGATCCCTCATTTCTTAGCAACCAATCCAATATACCCAAACAATTCATATGGCCCGACGATGAGAAGCCATGCTCCAATTCTAACCTTCAGGAACTCCATGTCCCCCTTATCGACCTGCAGGGTTTCCTGACAGGAAACCCTGAGGCGACCTTGGAGGCCTCTAAGCTCATCCGTGAAGCCTGTCTTAAGCATGGCTTCTTCCTAGTCACCAACCATGGTGTTGATGCTAAGTTGATCAAAGATGCCCATGATGTCATGGATGACTTCTTTGACCAACCTCTGGCTCAGAAGCAGAAAGCTCAAAGGAAACTTGGAGAGCATTGTGGCTATGCTAGTAGCTTTACTGGTAGGTTCTCCTCCAAGCTCCCTTGGAAGGAGACTCTCTCCTTTCAATACTCTCCTGACCACGACTCGATTGTTCAAGATTACTTTAACACCAGAGTTGGTGACGACTTGGAACACTTGGGGAAGGTTTACCAAGAGTATTGTGATGCGATGAGCAAACTTTCATTAGGAATCATGGAGCTACTTGGCTTAAGTCTTGGAGTAGGGAAAAAGTGTTTCAGAGAATTCTTTCAAGGGCATGATTCGGTGATGCGACTCAACTATTATCCACCATGTAAAAGGCCTGATCTTACCCTAGGAACTGGCCCTCATTGTGATCCTACTTCATTAACCATCCTTCACCAAGACCAAGTGGGTGGCCTTCAAGTTTATGCCGATGGAAAGTGGCGTTCCATTTCCCCCAATTTTAATGCTTTTGTCATTAACATTGGTGACACTTTTATGGTACGTACTTACATCTATACAATTGTACACGGGGCGGAGTTAGAAAAAAAAAATGTAATGGGGGTCAAAAAAAACTTCCAATATGCAAAGGAAAACAAAGATAATGAGGGGTCAATCTCTATAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96397.p1 GENE.R_Transcript_96397~~R_Transcript_96397.p1 ORF type:complete len:344 (+),score=47.08,DIOX_N|PF14226.2|8.2e-26,2OG-FeII_Oxy|PF03171.16|2.5e-20 R_Transcript_96397:103-1134(+)
MAIECMRNISPMPPITYKQPQDDQSNNNNNNHTQPLVFDPSFLSNQSNIPKQFIWPDDEKPCSNSNLQELHVPLIDLQGFLTGNPEATLEASKLIREACLKHGFFLVTNHGVDAKLIKDAHDVMDDFFDQPLAQKQKAQRKLGEHCGYASSFTGRFSSKLPWKETLSFQYSPDHDSIVQDYFNTRVGDDLEHLGKVYQEYCDAMSKLSLGIMELLGLSLGVGKKCFREFFQGHDSVMRLNYYPPCKRPDLTLGTGPHCDPTSLTILHQDQVGGLQVYADGKWRSISPNFNAFVINIGDTFMVRTYIYTIVHGAELEKKNVMGVKKNFQYAKENKDNEGSISIK*

Click here to download the sequence:
Link to NCBI Protein BLAST