Transcript Information: R_Transcript_96471.p2


Annotated TAIR IDAT3G24000.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8672774-8674881 | Forward length=665
E-Value2.1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.1468380615138
Condition 2: 8 Hour
Replicate 10.3139213454775
Replicate 20
Replicate 30.23271295667163
Condition 3: 24 Hour
Replicate 10
Replicate 20.14137986468319
Replicate 30.28061159854997


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96471.p2 GENE.R_Transcript_96471~~R_Transcript_96471.p2 ORF type:5prime_partial len:156 (-),score=27.81,PPR|PF01535.16|0.0025,PPR|PF01535.16|1e-06,PPR|PF01535.16|1.5,PPR|PF01535.16|0.65,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|9.4,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|3.8,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|6.9,PPR_1|PF12854.3|0.042 R_Transcript_96471:1402-1869(-)
GTGAAATTGATTGCTTTTGTCGGGCATACTCTTCTTCATATGTATGCCAAATCTGGGAGCATTGAGGATGCAGAAAAGGTTTTTTCCCGACTGATGAAACAAAATGTTGTTACATGGAACTCCATGCTGACTGGGTATGCCCAACATGGTCTTGGGGATAAAACACTGGATCAGTTTGAAAAGATGCTAAAAACTGGAATACAGCCTAATGTCATAACCTTTCTTTGTGTTCTTACTGCTTGTAGCCATGCTGGACTTCTAGAGAAAGGACAGTTTTACCTTGACATGATCAAGACCTATGGTTTAGAGCCACACATTGAGCATTATGTCACAGTAGTTGATTTGCTAGGTCGAGCAGGCAAACTTGATCAAGCATTAAGATTTATAAGGGATCGGACCTGCCCATTGAGCCCACCGCAGAGATATGGAAAGCTCTGCTGGGAGCATGCAGGATGCATAAAAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96471.p2 GENE.R_Transcript_96471~~R_Transcript_96471.p2 ORF type:5prime_partial len:156 (-),score=27.81,PPR|PF01535.16|0.0025,PPR|PF01535.16|1e-06,PPR|PF01535.16|1.5,PPR|PF01535.16|0.65,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|9.4,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.0028,PPR_3|PF13812.2|0.077,PPR_3|PF13812.2|3.8,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.0044,PPR_1|PF12854.3|6.9,PPR_1|PF12854.3|0.042 R_Transcript_96471:1402-1869(-)
VKLIAFVGHTLLHMYAKSGSIEDAEKVFSRLMKQNVVTWNSMLTGYAQHGLGDKTLDQFEKMLKTGIQPNVITFLCVLTACSHAGLLEKGQFYLDMIKTYGLEPHIEHYVTVVDLLGRAGKLDQALRFIRDRTCPLSPPQRYGKLCWEHAGCIKI*

Click here to download the sequence:
Link to NCBI Protein BLAST