Transcript Information: R_Transcript_96489.p1


Annotated TAIR IDAT3G46790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR2
Annotation TypeOrtholog
Chromosome Positionchr3:17231975-17233948 | Reverse length=657
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9947098049318
Replicate 21.5715793724774
Replicate 31.9203253074619
Condition 2: 8 Hour
Replicate 11.6128414037108
Replicate 21.8076161967425
Replicate 32.5542685603538
Condition 3: 24 Hour
Replicate 12.4744941922076
Replicate 22.4762640969959
Replicate 32.9161762232543


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96489.p1 GENE.R_Transcript_96489~~R_Transcript_96489.p1 ORF type:3prime_partial len:668 (+),score=122.35,PPR|PF01535.16|0.16,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|9.5,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.22,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|0.055,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|0.17,PPR|PF01535.16|0.11,PPR|PF01535.16|7e+03,PPR|PF01535.16|2.1e+03,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.9,PPR_2|PF13041.2|0.78,PPR_2|PF13041.2|4.4e+03,DYW_deaminase|PF14432.2|3.6e-40,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0053,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|9.9,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|5.1e+03 R_Transcript_96489:1745-3745(+)
ATGTGGGCACTTCTCTCTCCTCAAGTTATCCAACAACCAATCTTTCTTTTACCCATCAAATGCAAAGCTGCTGTTGCTTCTTCTTCTTCTTCTATTATCAAGGCAAACCAATCCACCCACATAAATTCTCCCCATTCTTCAATACCCACCTCTAATTCCAACATCCCCACAAACAACAACACCTTAATCCAATCACTATGCAAAAAGGGCAGCCTCAAACAAGCCCTTCAACTTCTTCCTTCAGAACCCAACCCTACCCAACTAACTTACGAGCTCTTAATCCTCTCTTGTGCCCTCCAAAACTCTCTTTCAGATGCTCATATTGTTCATCGCCACCTTATCGAAAATGGGTTTGGCCATGATCCTTTCCTTGCCACTAAATTGATCAATATGTACTCTGAATTGGAGTGCATTGACTATGCACGCCAAGTGTTCGATGAAATTCCTAGGAGAACTATTTTTGTTTGGAATGCCATTTTGCGTGCGCTTACGTTGGCGGGACATGGGGTTGAGGCATTGAGTCTTTATAGGGAGATGAATAGGATTGGAATGCCTTGTGATAGGTTTACTCATACTTATGCACTTAAGGCTTGTGTCGTGGCCGAAGCGGTTACTTCGTTGTTAAAGAAAGGGAAGGAGATTCATGGGCGTGGTTTGCGTCACGGGTATGAATCACATGTTCACATTATGACTACACTGTTGGATATTTATGCTAAGTTTGGGAAGGTATTGTATGCGAGGCATATTTTCTGTTTGATGCCTGTTAAGAATGTTGTCTCATGGAGTGCTATGATTGCTTGTTATGCTAAGAACGGGAGATCCTTTGAGGCTTTGGAGTTGTTTCATGAGATGGTTGATGGGAATCCTGATCTTTCGCCTAATTCAGTGACTATGGTTAATGTGCTTCAAGCATGTGCTGCTCTTGCGGCTTTGGGTCAGGGCAAGATGATGCACTGTTATATATTGAGAAGGGATCTCAACTCCATATTGCCAGTTAGTAGCGCCCTCTTGACAATGTATGCAAGATGTGGCAATCTCAAAGTGGCGCAACTGGTTTTTGATCAGATGCATAAGAGGGATGTTGTTTCGTGGAATTCATTGATTTCGAATTATGGGATTCACGGTTTTGGGATGAAGGCTGTTCAGATCTTCGAGGAGATGATTGATCGAGGAATTAAACCAACTGCCATCTCATTTGTTAGTGTGTTGGGTGCTTGCAGCCATGCAGGGCTTGTTGATGTGGGGAAACGGTTGTTTAAATCTATGGTCCAGCATCATGGGATATATCCGAGTGTAGAGCATTATGCGTGCATGGTGGATCTTCTAGGCCGTGCCAATCAATTAGATGAGGCAGCTGAAATTATAGAAGATATGAGGATTGAGCCAGGACCAAAAGTTTGGGGTTCTCTCCTTGGCTCTTGCAGGATTCACTGTAATGTTGAGCTTGCAGAGAAAGCAAGCAATCAACTATTCGAGCTTGAGCCCACCAATGCTGGAAATTACGTTCTGTTAGCAGATATTTATGCAGAAGCAAGGATGTGGAACGAGGTTAAAAGAGTGAAGAAGCTCCTAGAAGCGAATGAATTGCAGAAGGTCTCTGGCCATAGTTGGATTGAAGTGAGAAGGAAGATATACTCCTTCAAGTCAGTTGATGAGCTTAATCCACAGATAGAGCAAATTCATGCTTTGTTAGTTGAGCTTTCGGGGGAAATGAAGCAGCAGGGGTATGTCCCACAGACCAAAGTTGTGCTCTATGATCTTGATGAGAAAGAGAAGGAAAGGATTCTCTTGGGACACAGTGAAAAACTTGCAGTTGGCTTTGGACTCATAAATACCAGCAAGGGTGAAACAATCAGGATCACCAAGAACTTGAGGTTATGTGAAGATTGTCACACTGTGACCAAGTTCATTTCAAAATTTACAGGAAGAGAGATCATGGTTCGAGATGTTAATCGCTTTCACCATTTCCGTGATGGGGTTTGCTCTTGTGGGGATTACTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96489.p1 GENE.R_Transcript_96489~~R_Transcript_96489.p1 ORF type:3prime_partial len:668 (+),score=122.35,PPR|PF01535.16|0.16,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|9.5,PPR|PF01535.16|0.00078,PPR|PF01535.16|0.22,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|0.055,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|0.17,PPR|PF01535.16|0.11,PPR|PF01535.16|7e+03,PPR|PF01535.16|2.1e+03,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.9,PPR_2|PF13041.2|0.78,PPR_2|PF13041.2|4.4e+03,DYW_deaminase|PF14432.2|3.6e-40,PPR_1|PF12854.3|0.00058,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0053,PPR_3|PF13812.2|15,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|9.9,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|5.1e+03 R_Transcript_96489:1745-3745(+)
MWALLSPQVIQQPIFLLPIKCKAAVASSSSSIIKANQSTHINSPHSSIPTSNSNIPTNNNTLIQSLCKKGSLKQALQLLPSEPNPTQLTYELLILSCALQNSLSDAHIVHRHLIENGFGHDPFLATKLINMYSELECIDYARQVFDEIPRRTIFVWNAILRALTLAGHGVEALSLYREMNRIGMPCDRFTHTYALKACVVAEAVTSLLKKGKEIHGRGLRHGYESHVHIMTTLLDIYAKFGKVLYARHIFCLMPVKNVVSWSAMIACYAKNGRSFEALELFHEMVDGNPDLSPNSVTMVNVLQACAALAALGQGKMMHCYILRRDLNSILPVSSALLTMYARCGNLKVAQLVFDQMHKRDVVSWNSLISNYGIHGFGMKAVQIFEEMIDRGIKPTAISFVSVLGACSHAGLVDVGKRLFKSMVQHHGIYPSVEHYACMVDLLGRANQLDEAAEIIEDMRIEPGPKVWGSLLGSCRIHCNVELAEKASNQLFELEPTNAGNYVLLADIYAEARMWNEVKRVKKLLEANELQKVSGHSWIEVRRKIYSFKSVDELNPQIEQIHALLVELSGEMKQQGYVPQTKVVLYDLDEKEKERILLGHSEKLAVGFGLINTSKGETIRITKNLRLCEDCHTVTKFISKFTGREIMVRDVNRFHHFRDGVCSCGDYW

Click here to download the sequence:
Link to NCBI Protein BLAST