Transcript Information: R_Transcript_96554.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4463632571847
Replicate 25.579436474261
Replicate 36.4074790478748
Condition 2: 8 Hour
Replicate 12.7396771968946
Replicate 24.6910940925564
Replicate 34.315767560092
Condition 3: 24 Hour
Replicate 13.8530585556986
Replicate 24.4727448099772
Replicate 34.897947901963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96554.p1 GENE.R_Transcript_96554~~R_Transcript_96554.p1 ORF type:complete len:143 (+),score=10.18,zf-RVT|PF13966.2|9e-11,zf-RVT|PF13966.2|5.7e+03 R_Transcript_96554:556-984(+)
ATGGCAATGCATAAGAGGTTGAAGACCAGAGATTTTCTGAAGAAAAGAGGGATAGTAAGCGATGATAAATGCCTTATCTGTCTCTCAGGAGTGGAGTCTTGCAAGCACTTATTTTTTCAGTGTCAAGAGGTCAGGATGGTTTGGAGGCAGCTAATACATTGGATGAAGATCCAAAGAGGCCCCATTAGCTTCCCCCATGAGATTAAATGGTTCACCAAGAGGAGAAGAAGTAAAAGCATGATCAATTTGCTACAAAGAAGTGTATTTGTCAAAGCTATAGCAAAAATCTGGCATGAACGAAACATCAGAGCATTTCAAAGCAAGAAACGTGACCCTCTAGTTATAGTAAGGCAGATTCACTTTGTAAGTAGTTTACTTATGCTGAGCAAATATCGACAGAAGGGAGAAGCATGCTTGAATACTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96554.p1 GENE.R_Transcript_96554~~R_Transcript_96554.p1 ORF type:complete len:143 (+),score=10.18,zf-RVT|PF13966.2|9e-11,zf-RVT|PF13966.2|5.7e+03 R_Transcript_96554:556-984(+)
MAMHKRLKTRDFLKKRGIVSDDKCLICLSGVESCKHLFFQCQEVRMVWRQLIHWMKIQRGPISFPHEIKWFTKRRRSKSMINLLQRSVFVKAIAKIWHERNIRAFQSKKRDPLVIVRQIHFVSSLLMLSKYRQKGEACLNTL*

Click here to download the sequence:
Link to NCBI Protein BLAST