Transcript Information: R_Transcript_96594.p1


Annotated TAIR IDAT1G78980.1
Annotated Gene NameSTRUBBELIG-receptor family 5
Annotated Gene Symbol(s)SRF5
Annotation TypeHomolog
Chromosome Positionchr1:29707923-29711266 | Reverse length=699
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0881900927516
Replicate 22.1082942646352
Replicate 32.2686177536767
Condition 2: 8 Hour
Replicate 11.9534802846496
Replicate 22.0915267746914
Replicate 32.5217505813743
Condition 3: 24 Hour
Replicate 12.4947273328592
Replicate 22.5483380286224
Replicate 32.4687644901315


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_96594.p1 GENE.R_Transcript_96594~~R_Transcript_96594.p1 ORF type:complete len:727 (+),score=121.01,Pkinase|PF00069.21|7e-38,Pkinase_Tyr|PF07714.13|3.5e-36,LRR_8|PF13855.2|63,LRR_8|PF13855.2|1.3e-11,LRR_8|PF13855.2|2.4e-06,LRR_8|PF13855.2|0.63,LRR_4|PF12799.3|53,LRR_4|PF12799.3|9e-05,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.56,LRRNT_2|PF08263.8|9.7e-08,LRRNT_2|PF08263.8|1.6e+04 R_Transcript_96594:518-2698(+)
ATGTTCCCCAATTTCATAAGGCTAGGGTCCTTCTTTCTTGGGCTACTTACTCTTGTTCACTGCAAAACAGATTCTAAAGATGTTGCTGCTCTTAATGTTATGTTCACAAGCTTGAATTCCCCTAAAAAGTTGAGTGATTGGCAATCAAGTGGAGGTGATCCTTGTGGTGATTCTTGGACAGGGATTGATTGTTCTGGCTCTTCTGTCACTGCAATAAAAATATCTGGGCTTGGACTGTCAGGATCATTAGGCTATCAATTATCAAGCCTTTCTTCTGTCACCTACTTTGATGTGAGCCAGAACAAACTCAGTGGTGATGTACCATACCAACTTCCTCCCAATGTAAAACACTTAGATCTTTCAAGCAATGGCTTTACTGGCACTGTTCCTTACTCTGTATCTCAGTTGAGTAGCCTGAAGCACCTTGATCTTAGTCATAATAAATTGAATGGGCAGTTAACTGACATGTTTAGTCAACTTCAGAAACTTGATTTACTGGATCTTTCGTATAACAAGCTCGCTGGCAGTTTGCCTCAGGGCTTCGGATCTCTCTCAAGCCTCTCCTCTCTGTTTCTGCAGAATAATCAATTCACTGGTCAAATAAACGTGCTTGCCAAACTAAAACTTGATGATCTCAATGTAGCAAACAACAAATTCAGTGGGTGGATCCCATCTCCATTGACAAAAGTAAAAAACTTAAAGATTGAAGGAAATTCTTGGTCTTCTGGACCAGCTCCCCCTGGAATGACTTCAAGCAACAATGTAAAGCAGTCTGCAAAAGGTGGGCTCAGCGGAGCTATGATTGCTGTGATTGTTATGGGAATTTTGGTGGTCATTGCAACTGTGCTTGCTATTTTGTCAAAGAAACGATCTTCTTTCTCCTCAAGTTTACTCGAAGAACAAGGGAGTCATCGAGGGCCCAAATCATATAATTTCTTTGGGTCCAAAAAATACTCAAAAGACTTTGGTATTGATACTGGCAAAGGCTTAAAAGATCTTAAATCATTTGATTCAACAAGCTCAGTCGACATAAAGTCTTTACAATCTTCTGGCCCAATTGCCCTTAAACCTTCCCTGTCAGCCCGAGTTAAGTCGTTCAGAGGAGGCGAGCCTGGAAATAATGCAAGTTCCCAAAGAAGTGTATCTTTTGAAGTTACAACTTTTGGATTGGCTGATCTGCAGTCTGCTACTAGCAACTTTGCTACAGGTAGATTACTTGGAGAGGGATCTATTGGACGAGTTTATAAGGCCAAATTTTCTGACGGAAAGGTATTAGCTGTGAAAAAAATCAACTCGTCATTCTTTCGAGATGGCCAGGGTGAAAGATTCTCAGAGACTGTTTCAAGTATTTCCAAGCTCTGCCATCCAAATATTGCACAGCTTGTAGGGTATTGCTCTGAGCAGGGCCATAACATGCTTGTATATGACTACTTTAGGAATGGTTCACTTCATGAGTTCCTACACTTGTCAGATGAATTCAGCAAACCCCTTACTTGGAATACCAGAGTTAAAATTGCTCTAGGGACTGCACAAGCTATTGAGTACATGCATGAAACTTGTTCTCCACCATCGGTTCACAGGAGTATCAAGTCATCCAACATTTTCCTCGATATTGAGTTGAACCCTCGCCTGTTTGACTGTGGTTTGGCAACTTTTTACCAGGAAGCAAGCACAAACATTGCAGCTGGCTATGGTGCTCCAGAATGCATAAAAGGATCGGCTTATACATTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGTTGGAGCTCTTGACTGGTCGGATGTCGTTTGACAGGTTTATATTATCGGTCACTATTCAGCATCTCACCCTTTGTTATTCTGCCATATTCTGTAACCAGAAAATATTACCTTCCTTTATTTTCAGTTCAAAACCAAAAGCTGAGCAATATCTCGTTCAATGGGCCACGCCACAGCTCCATGATATTGATGCTTTGGAGAAAATGGTTGATCCTGCACTACGGGGATTGTACCCTCCCAGGTCGATCTCACGGTTTGCTGATATTATAGCTTTCTGTGTTCAGGCAGAGGCGGAGTTCCGGCCACCTGTATCAGAGGTTGTGCAGTCATTGGTTCGTTTAATCCAACGGTCGAGCATGAACGTGCAAGGGGGCGCCGCGCTTGGAGCTTCTCTTGGGATGGATGACTATGAATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_96594.p1 GENE.R_Transcript_96594~~R_Transcript_96594.p1 ORF type:complete len:727 (+),score=121.01,Pkinase|PF00069.21|7e-38,Pkinase_Tyr|PF07714.13|3.5e-36,LRR_8|PF13855.2|63,LRR_8|PF13855.2|1.3e-11,LRR_8|PF13855.2|2.4e-06,LRR_8|PF13855.2|0.63,LRR_4|PF12799.3|53,LRR_4|PF12799.3|9e-05,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.21,LRR_4|PF12799.3|0.56,LRRNT_2|PF08263.8|9.7e-08,LRRNT_2|PF08263.8|1.6e+04 R_Transcript_96594:518-2698(+)
MFPNFIRLGSFFLGLLTLVHCKTDSKDVAALNVMFTSLNSPKKLSDWQSSGGDPCGDSWTGIDCSGSSVTAIKISGLGLSGSLGYQLSSLSSVTYFDVSQNKLSGDVPYQLPPNVKHLDLSSNGFTGTVPYSVSQLSSLKHLDLSHNKLNGQLTDMFSQLQKLDLLDLSYNKLAGSLPQGFGSLSSLSSLFLQNNQFTGQINVLAKLKLDDLNVANNKFSGWIPSPLTKVKNLKIEGNSWSSGPAPPGMTSSNNVKQSAKGGLSGAMIAVIVMGILVVIATVLAILSKKRSSFSSSLLEEQGSHRGPKSYNFFGSKKYSKDFGIDTGKGLKDLKSFDSTSSVDIKSLQSSGPIALKPSLSARVKSFRGGEPGNNASSQRSVSFEVTTFGLADLQSATSNFATGRLLGEGSIGRVYKAKFSDGKVLAVKKINSSFFRDGQGERFSETVSSISKLCHPNIAQLVGYCSEQGHNMLVYDYFRNGSLHEFLHLSDEFSKPLTWNTRVKIALGTAQAIEYMHETCSPPSVHRSIKSSNIFLDIELNPRLFDCGLATFYQEASTNIAAGYGAPECIKGSAYTFKSDVYSFGVVMLELLTGRMSFDRFILSVTIQHLTLCYSAIFCNQKILPSFIFSSKPKAEQYLVQWATPQLHDIDALEKMVDPALRGLYPPRSISRFADIIAFCVQAEAEFRPPVSEVVQSLVRLIQRSSMNVQGGAALGASLGMDDYEY*

Click here to download the sequence:
Link to NCBI Protein BLAST