Transcript Information: R_Transcript_97109.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value3.7E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.91123723248
Replicate 212.128930823007
Replicate 313.288131760875
Condition 2: 8 Hour
Replicate 114.857927759251
Replicate 217.204853261301
Replicate 320.750991752918
Condition 3: 24 Hour
Replicate 116.103898759239
Replicate 214.560753442323
Replicate 314.237633145846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97109.p1 GENE.R_Transcript_97109~~R_Transcript_97109.p1 ORF type:complete len:412 (+),score=53.94 R_Transcript_97109:540-1775(+)
ATGTCCTCATCCCCTCCACCCCAACCCGAACCAGAATCCGAGCCAGAACCCGAGTCCGAACCCGAAACCCAACCCTTACCTCTACCCCAACCCGACCCATCTTCTCTTTCTCCAGCCCTAGCTCCAACCCTCTACTCTATCTTTTTCAACCAAGACCACTCCTGCTTCTCCGCCGCCACGTCATCCGGCTTCATCATCTTCAACTCCCTCCCTTTCCGAGAGATCTTCCGCCGCTCTTTCCCGACCCCCACCACTTCCGCGGACGCCGGTGCTGGTGGACCCGGCGGCGATGGCGGTGGGGGCGGCGGTGGGATAGGACTCGTCCAGATGCTGTTCCGGTGTAACATACTGGCACTGGTTGGGGGCGGGCCCCACCCGCAGTACCCGCCCAACAAGGTTATGATCTGGGACGACCACCAGTGCCGCTGCATCGGAGAGCTCTCCTTCCGGTCCCCGGTTAAGTCTGTCCGGTTGCGTCGTGATCGCATCATCGTTGTTCTTCTTCAGAAGCTGTTTGTTTATAATTTTGCTGACTTGAAGCTCCTTCACCAGATTGAGACCATTGCTAACCCTAAGGGTTTGTGTGAGGTTTCTTGTTTGTCCAGTTCTCTTGTTTTGGTTTGTCCTGGATTGCAGAAGGGTCAGATTAGGGTTGAGCATTACGGGTCTAAACGGACTAAGTTTATATTGGCTCATGATTCGAGGATTGCTTGCTTGGCTTTGACTCTTGATGGGAGTAAGGTTGCTACTGCTAGTAGTAAGGGCACTCTTGTTAGGGTTTTCAACACATTGGATGGCACCTTGCTAAGAGAGGTTAGAAGGGGAACTGACAGAGCAGAGATACAAAGCCTAGCTTTTTCTTCCACTGCCCAATGGTTAGCAGCGTCAAGTGACAGGGGAACCATTCATGTTTTCTGCCTGAAGCTTGATCCAGACTCTGAAGCAAAGAGTGGGTCTTCTAGTCCAACTGAACAGCCAAGTTCTCCACGTTCACCCATGTCATCTATCCCTTTTATGAAAGGTGTGTTGCCCAAGTATTTTAACTCAGAGTGGTCTATGGCCCAGTTTCGGTTGCAAGAAGGTATCCAGTATATTGTTGCCTTTGGCCCTCAAGAGAACACAGTCATAGTAGTTGGCATGGATGGAAGCTTCTATCGCTGTAGATTTGATCCTATATCTGGAGGAGAGATGGAACAACTAGAGTATTACAATTTCCTGAAGCCAGAAACCATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97109.p1 GENE.R_Transcript_97109~~R_Transcript_97109.p1 ORF type:complete len:412 (+),score=53.94 R_Transcript_97109:540-1775(+)
MSSSPPPQPEPESEPEPESEPETQPLPLPQPDPSSLSPALAPTLYSIFFNQDHSCFSAATSSGFIIFNSLPFREIFRRSFPTPTTSADAGAGGPGGDGGGGGGGIGLVQMLFRCNILALVGGGPHPQYPPNKVMIWDDHQCRCIGELSFRSPVKSVRLRRDRIIVVLLQKLFVYNFADLKLLHQIETIANPKGLCEVSCLSSSLVLVCPGLQKGQIRVEHYGSKRTKFILAHDSRIACLALTLDGSKVATASSKGTLVRVFNTLDGTLLREVRRGTDRAEIQSLAFSSTAQWLAASSDRGTIHVFCLKLDPDSEAKSGSSSPTEQPSSPRSPMSSIPFMKGVLPKYFNSEWSMAQFRLQEGIQYIVAFGPQENTVIVVGMDGSFYRCRFDPISGGEMEQLEYYNFLKPETI*

Click here to download the sequence:
Link to NCBI Protein BLAST