Transcript Information: R_Transcript_97112.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value3.8E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.153439213759
Replicate 21.5334376708532
Replicate 31.5442744446844
Condition 2: 8 Hour
Replicate 12.6136597415599
Replicate 21.7587210436887
Replicate 32.0395068112794
Condition 3: 24 Hour
Replicate 12.8374817921882
Replicate 20.61952974411734
Replicate 31.352610963797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97112.p1 GENE.R_Transcript_97112~~R_Transcript_97112.p1 ORF type:3prime_partial len:356 (+),score=37.50 R_Transcript_97112:421-1485(+)
ATGTCCTCATCTCCTCCTCCCCAAACCGAACCCGAATCCGACCCAGAACCCGATTCCGAACCCGAAACCCAACCCGACCCATCTTCTCTTTCTCCAGCCCTAGCTCCAACCCTCTACTCTATCTTTTTCAACCAAGACCACTCCTGCTTCTCCGCCGCCACGTCATCCGGCTTCATCATCTTCAACTCCCTCCCTTTCCGAGAGATCTTCCGCCGCTCTTTCCCGACCCCCACCACTTCCGCGGACGCCGGTGCTGGTGGACCCGGCGGCGATGGCGGTGGGGGCGGCGGTGGGATAGGACTCGTCCAGATGCTGTTCCGGTGTAACATACTGGCACTGGTTGGGGGCGGGCCCCACCCGCAGTACCCGCCCAACAAGGTTATGATCTGGGACGACCACCAGTGCCGCTGCATCGGAGAGCTCTCCTTCCGGTCCCCGGTTAAGTCTGTCCGGTTGCGTCGTGATCGCATCATCGTTGTTCTTCTTCAGAAGCTGTTTGTTTATAATTTTGCTGACTTGAAGCTCCTTCACCAGATTGAGACCATTGCTAACCCTAAGGGTTTGTGTGAGGTTTCTTGTTTGTCCAGTTCTCTTGTTTTGGTTTGTCCTGGATTGCAGAAGGGTCAGATTAGGGTTGAGCATTACGGGTCTAAACGGACTAAGTTTATATTGGCTCATGATTCGAGGATTGCTTGCTTGGCTTTGACTCTTGATGGGAGTAAGGTTGCTACTGCTAGTAGTAAGGGCACTCTTGTTAGGGTTTTCAACACATTGGATGGCACCTTGCTAAGAGAGGTCAGGTGCTTTGGGAAAAAAAAAAAGAAAAGGAGAACTTCAAGCAGAGAGCAGCCACAACGTTCATCCTCTCCCCCAAAATTGAAAACCCTAACCCTAACCACTCAAGCAATCACATCTCCTCTCATCCTCTCACCAGAGACTCGCCGGATTCTCGCCGAAGAATCGCCGACAGAGGTTAGAAGGGGAACTGACAGAGCAGAGATACAAAGCCTAGCTTTTTCTTTCAATGCCCGATGGTTAGCAGCATCAAGTGACAGGGGAACCATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97112.p1 GENE.R_Transcript_97112~~R_Transcript_97112.p1 ORF type:3prime_partial len:356 (+),score=37.50 R_Transcript_97112:421-1485(+)
MSSSPPPQTEPESDPEPDSEPETQPDPSSLSPALAPTLYSIFFNQDHSCFSAATSSGFIIFNSLPFREIFRRSFPTPTTSADAGAGGPGGDGGGGGGGIGLVQMLFRCNILALVGGGPHPQYPPNKVMIWDDHQCRCIGELSFRSPVKSVRLRRDRIIVVLLQKLFVYNFADLKLLHQIETIANPKGLCEVSCLSSSLVLVCPGLQKGQIRVEHYGSKRTKFILAHDSRIACLALTLDGSKVATASSKGTLVRVFNTLDGTLLREVRCFGKKKKKRRTSSREQPQRSSSPPKLKTLTLTTQAITSPLILSPETRRILAEESPTEVRRGTDRAEIQSLAFSFNARWLAASSDRGTI

Click here to download the sequence:
Link to NCBI Protein BLAST