Transcript Information: R_Transcript_97154.p1


Annotated TAIR IDAT2G44880.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18505239-18506906 | Forward length=555
E-Value2.6E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68293391327179
Replicate 20.071415987810538
Replicate 30.62331258765041
Condition 2: 8 Hour
Replicate 10.1249278823839
Replicate 20.38028710614261
Replicate 30.52479146351459
Condition 3: 24 Hour
Replicate 10.50757056795944
Replicate 20.33758049322312
Replicate 30.70725576369226


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97154.p1 GENE.R_Transcript_97154~~R_Transcript_97154.p1 ORF type:complete len:588 (+),score=91.48,PPR|PF01535.16|10,PPR|PF01535.16|0.0014,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.0027,PPR|PF01535.16|8.7e-07,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00019,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|93,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|5.5e-08,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|28,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|7.7e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|0.0003,PPR_3|PF13812.2|50,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.00085,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.3e+03,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|0.025,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|47,TPR_19|PF14559.2|41,SNN_transmemb|PF09049.6|1e-05 R_Transcript_97154:137-1765(+)
ATGCCACCAAATTCATTACCTGCAATTCACCATGCACGCCAAGTGTTCGATCAAATTCCCAACAAGAATGATTCTTTTTTATGTAGTATAATGATTAAATCCCATAGTGATAATCACCAATTTACTGAGGCTTTGCTTCTTTATAACTATCTTAGGAAAAACACATATTTTGTGCCTGAAGTACATACCTTTTTGTCATTAACCAAGTCTTGTAGCTCAATTTCATATAAATGGGAAGGCCAACAGTTGCATAACCATGTAATTAAAAGTGGGTTTAGCGTAGATTTGTTTCTTTCCACATCAATGGTTGACATGTATGGTAAGATGTGGGATATGGGTTCTGCCCGGAAGGTGTTCGATGAAATGCCTGAGAGAAGTGTAGTATCTTGGACTGCTTTAGTTTGTGGGTATGCTATGACAGGCGATGTTGACAATGCCAGGGACTACTTTGATCAAATGCCTGACAAAGATACATCAGCTTATAATGCTATGATTGATGCATATATTAAAGTAAATGACTTGGATTCAGCTAGAAGCTTGTTTGTTGTGATGCCAGAGAGGAATGTGATCTCTTGGACAACTTTGATTTCAGGGTTTTGTAACAATAATGATATTCAGTCAGCTATGCTGCTATTTGAGGCTATGCCTGAGAAGAATCTTGTTTCTTGGAACGCGATGCTTGGTGGGTATTGTCGAAACAAACAACCTCATGATGCTTTGAAGTTGTTCTATGAATTACAATCGAAAACAGTGCTTGAAGCCGATGAAGTCACCATTATCAGCATTCTACCAGCAATAGCGGATTTGGGTGCATTGGATTTAGGATGTTGGGTTCATGAGTATGTCAAGAGGAAAAGACTAGACAAAAGGATAAAGATAAGCACCTCATTGGTAGATATGTATGCAAAATGTGGTGAAATCACCAAAGCAATGCAAGTGTTTGAAGAGATCACTGAAAAGATAATATCTTCTTGGAATGCCATTATACATGGGCTTGCAGTTAATGGGTATGGTAAAGAGGCATTGGATATTTTTCATGACATGATTGGTAGGGGATATGCACCAAATGGAATCACAATGGTTGGTGTTTTGTCTGCTTGTAGTCATAATGGTTTGGTTGAGCACGGAAAGAGATGGTTCGAGTCAATGGAAATTTTTGGACTTACCCCACAAATTGAACATTATGGTTGTATGATAGACCTTTTTAGTAGGGTAGGAAACTTGGATGAAGCTGAGAAATTATTAGAATCTATGCCATTTGAGGTTAATGAGATAATTATTAGTTCCTTCCTTTCAGCTTGTGTGAATTGGAATGATCTGTTTCGGGCTGAGAGAGTATTAAATCGAGCAGTTCAAATGGACCCATATAATGCGGGGAACTATGTTCTACTGAGGAACTTGTATGCCATGGAACGGAGATGGGAAGAAGTGAAGAAAATAAAGGGACTCATGAGGACGAGTGGTGCAAAAAAAGAAGCTGGTTCGAGTGCTATTGAAGTTAATGGTGTGTTATGGGAGTTTATATCAGGAGGTACAATGCATCCTCAGACGAAGGATATAATACTATTATTAAGGCAGCTCGAAACACACTTGAAGGGGATGGAGGAGTTAAACACAAAACTGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97154.p1 GENE.R_Transcript_97154~~R_Transcript_97154.p1 ORF type:complete len:588 (+),score=91.48,PPR|PF01535.16|10,PPR|PF01535.16|0.0014,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|0.0027,PPR|PF01535.16|8.7e-07,PPR|PF01535.16|0.13,PPR|PF01535.16|0.00019,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|93,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|0.0024,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|5.5e-08,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|28,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|7.7e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|0.045,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|0.00027,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|0.54,PPR_1|PF12854.3|0.0003,PPR_3|PF13812.2|50,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.00085,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|5.1e+02,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.3e+03,TPR_19|PF14559.2|6.4e+03,TPR_19|PF14559.2|0.025,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|47,TPR_19|PF14559.2|41,SNN_transmemb|PF09049.6|1e-05 R_Transcript_97154:137-1765(+)
MPPNSLPAIHHARQVFDQIPNKNDSFLCSIMIKSHSDNHQFTEALLLYNYLRKNTYFVPEVHTFLSLTKSCSSISYKWEGQQLHNHVIKSGFSVDLFLSTSMVDMYGKMWDMGSARKVFDEMPERSVVSWTALVCGYAMTGDVDNARDYFDQMPDKDTSAYNAMIDAYIKVNDLDSARSLFVVMPERNVISWTTLISGFCNNNDIQSAMLLFEAMPEKNLVSWNAMLGGYCRNKQPHDALKLFYELQSKTVLEADEVTIISILPAIADLGALDLGCWVHEYVKRKRLDKRIKISTSLVDMYAKCGEITKAMQVFEEITEKIISSWNAIIHGLAVNGYGKEALDIFHDMIGRGYAPNGITMVGVLSACSHNGLVEHGKRWFESMEIFGLTPQIEHYGCMIDLFSRVGNLDEAEKLLESMPFEVNEIIISSFLSACVNWNDLFRAERVLNRAVQMDPYNAGNYVLLRNLYAMERRWEEVKKIKGLMRTSGAKKEAGSSAIEVNGVLWEFISGGTMHPQTKDIILLLRQLETHLKGMEELNTKLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST