Transcript Information: R_Transcript_9719.p1


Annotated TAIR IDAT4G04790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2435007-2439344 | Reverse length=821
E-Value1.7E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4005104393876
Replicate 24.7241675936671
Replicate 37.9652973913894
Condition 2: 8 Hour
Replicate 16.0379916972184
Replicate 25.8189112973085
Replicate 38.0032101371706
Condition 3: 24 Hour
Replicate 18.974415552648
Replicate 27.7945289942836
Replicate 37.6606966404141


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_9719.p1 GENE.R_Transcript_9719~~R_Transcript_9719.p1 ORF type:complete len:880 (+),score=155.78,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|40,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|15,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|5e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|6.2e+02,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|37,PPR|PF01535.16|0.14,PPR|PF01535.16|41,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.051,PPR|PF01535.16|0.0088,PPR|PF01535.16|59,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|38,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7.3e+02,TPR_19|PF14559.2|0.073 R_Transcript_9719:63-2702(+)
ATGCCCCGTACCAAAGTCAAGAAACTCAGCTCTCTTTTCCGCTCCGCCGTCAAAGCCACGGCTACCGCCGCCACCACCGCTAAACGCGACGTCGTCAAGCTCAAAGTCTCTTCTTCTTCTCCAGCTCGTTCTACCAGTTCCACCAACTTACGGAGGTCCACTAAGAGTAAAAAAGATGGGCCTATCAGTGGCATGATTCACCAAAGCCTTCATCATGGCTCTCCTTCGCTCTCCTCTTCTGCTGGAATTAGTAGTAGTGCGAGTGCTAGTGCTAGAGCAGATACTGATGAAGACGATTCTTCTGAAGATGATTCAGCTAAGCATATATCAAATGAGATATCGACAATACTGTGTGGTTATGGTGACATGTTTTGGGAATTAAATGATGATTCATCTGAGACAGAAGTAGCTGATGGTGACAATGATTCAGAGGATGATCCTGAATCTTCTTGGTTTTCCAACTTGTTTAACAGCAGTATGTCATTGCGCCGGAAAGAATTATCCCGTGAAAGGAAGAATAAATGGATTTTCAAGAATACTCAAAAAAACCGTTTTGATAAGTTAGTCAATATGTGCTTAACAAAACTGGGATCAGGTTCAACTTTTGAGGTGCTGTATAAACTAGGCCGAGAGACTGGTTTGAAGGAGTACACTGCTTTTATAAATGGTTGCATACAGACAGCGAGACGTAGCAAAGATGAAAAAGCCCAAGTAGAGCAGGTTTTGGAGATTTACCAGCTGTTCCAGTTAATGAAGGAACGGGGTTTTCCAATAGAAGAGGAAACATTCGGCCCTTTTCTTTTGTATCTAATTGACATGCACTTAACAGACCACTTTTTTCTTTTTGTTGAGATTGTCAAAGATGAAGATGTTTGTTTACATCCTCGATTAGGCTACTATGAAATGCTTCTTTGGATTGAGATGGATGATGATGAAAAGATTCAGGAGCTTTGTGATCATATTGCTACGGGTGAGAGTGAATCTGGATCCTTATTGCATGAAAATTACTTGTTGGCATTGTGTGAAAGAGACAGGGAAAAGGACCTACGGCCGTTGTTAGAAATCATAGACATAACCAAAGTTTCATCCATTAAGAATGTATCTTGTATTTTTCAATCCCTTGGGAGGCTATCACTGGAGTCCTACGCAGAGTCTTTTATCCAGACATTGAAAGATTATGATCATGGGGCTCAAAGCATCTCGAATCTGGTTTTTTGCTATGCAACTAGCTTGAAAAATTTAGCGGTGGAGGATGTTATCATGAAGTTCAAAGAGATGCATGTGACACTGGATATCAAGCTTCTACCTGGGTCTTATGAAAATCTCATTAAATTTTGCTGTGATGCACATAACGTTCATATGGCTTTGGATATAGTTGACGAGATGTGTGAAGCTGGATTAGTGTTATCCACAGAAACTCTCAACTACATATGTCGTGCTTGTGAGGACACTTCTGAGTATATTTTGGTTCGCCGGATCCATTCAATACTCTGTCACCACAATCTGAAGGCAAATAATGAAACGTTCAGGAGTATTATAAATCTGAATGTTAGAATGAAAGATTTTGACAGTGCATATACTGTGCTGAAGGGTTTGGAGAGGTTTAATTTAATGCCCACAGCAAGTATGTATAATGCTATAATAGCTGGTTATTACCGAGAGAAAAACTTGGCTGGCGTACTGAGAGTTCTTGAAGAAATGAAGCATGCAAAAGTCAAAGCTGATGCCCAGACTTTCAGCTATCTTATATCCAATTCTGTTTGCGAAGAAGACGTCGTTAAGTATTTTGAAGAACTAAAGCATGATGGAGTTCCTGTTACAAAGCATATTTACATGGCTCTCATCAATGCATATGCTGCGTGTGGCCAATTCGAGAAGGCTAAGCAGGTGGTCCTAGAGAAAGGGGTACCTGTAAAGAACTTAACTGAAATCAGAAGTGTTCTTGTCGCTAGCCTGGCATCACATGGGCAGATTTCCGATGCCCTGGAGATTTATATTGAAATGAAACAGAGTGGTCGCTGTTTAGAGCCAAAGGCTATTTTGACTCTCATTGAAAGCCTGGTGTTTGAAGAGGATTTGAGTACGTTGCTTCAATTACTTGAAGATTTGAATGATCCTGATAATTGGGTTGACGGTTGCTGCAGAGTTATCTTGTGCTGTGTCAGAAACAAGGAGCTAAGGTCTGCTGTTGACTTGCTTAGGAAACTTGCAGATTATTTCAAAGATGATGGATTGGCGAGAGAAGTTATCTTTGATGAGGTATTTTCACAAATAGCAGACATGGAGTCTCCTGATTTGCAGATTGGCTGGGGCTTGCTTAAAGCTATCAAGGAAGAACTTAAGCTCCGTCCTTCTCGAAAATGTCTGGATTTTCTACTCGGTGCTTGTGTCAGTGTCAAGGATCTCCAGAGAGCTCAGTTGGTTTGGAATGAGTACCCAGAAGCTGGCCTTCCGTACAACATTTTAAGCTACTTACGGATGTACCAGGCTTATTTGGCTTCAGGAAGTTACAAAGCAGCCACCCGCTTCTTGAGTAAAATACCGAAAGATGATCTCCATGTTCAATCTGTGATCCACGCATGTGGTGCAACTTACGGAAAGGCCAAGGACAAGACAAAGAAGAAGAATAAGAAAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_9719.p1 GENE.R_Transcript_9719~~R_Transcript_9719.p1 ORF type:complete len:880 (+),score=155.78,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|40,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|15,PPR_2|PF13041.2|4.6,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|2.9e+03,PPR_2|PF13041.2|5e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|2.6e+02,PPR_3|PF13812.2|6.2e+02,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|37,PPR|PF01535.16|0.14,PPR|PF01535.16|41,PPR|PF01535.16|0.0034,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|0.051,PPR|PF01535.16|0.0088,PPR|PF01535.16|59,PPR|PF01535.16|3.3e+03,PPR|PF01535.16|1.5e+04,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|5.4e+03,PPR_1|PF12854.3|0.042,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|38,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|1.6e+04,TPR_19|PF14559.2|7.3e+02,TPR_19|PF14559.2|0.073 R_Transcript_9719:63-2702(+)
MPRTKVKKLSSLFRSAVKATATAATTAKRDVVKLKVSSSSPARSTSSTNLRRSTKSKKDGPISGMIHQSLHHGSPSLSSSAGISSSASASARADTDEDDSSEDDSAKHISNEISTILCGYGDMFWELNDDSSETEVADGDNDSEDDPESSWFSNLFNSSMSLRRKELSRERKNKWIFKNTQKNRFDKLVNMCLTKLGSGSTFEVLYKLGRETGLKEYTAFINGCIQTARRSKDEKAQVEQVLEIYQLFQLMKERGFPIEEETFGPFLLYLIDMHLTDHFFLFVEIVKDEDVCLHPRLGYYEMLLWIEMDDDEKIQELCDHIATGESESGSLLHENYLLALCERDREKDLRPLLEIIDITKVSSIKNVSCIFQSLGRLSLESYAESFIQTLKDYDHGAQSISNLVFCYATSLKNLAVEDVIMKFKEMHVTLDIKLLPGSYENLIKFCCDAHNVHMALDIVDEMCEAGLVLSTETLNYICRACEDTSEYILVRRIHSILCHHNLKANNETFRSIINLNVRMKDFDSAYTVLKGLERFNLMPTASMYNAIIAGYYREKNLAGVLRVLEEMKHAKVKADAQTFSYLISNSVCEEDVVKYFEELKHDGVPVTKHIYMALINAYAACGQFEKAKQVVLEKGVPVKNLTEIRSVLVASLASHGQISDALEIYIEMKQSGRCLEPKAILTLIESLVFEEDLSTLLQLLEDLNDPDNWVDGCCRVILCCVRNKELRSAVDLLRKLADYFKDDGLAREVIFDEVFSQIADMESPDLQIGWGLLKAIKEELKLRPSRKCLDFLLGACVSVKDLQRAQLVWNEYPEAGLPYNILSYLRMYQAYLASGSYKAATRFLSKIPKDDLHVQSVIHACGATYGKAKDKTKKKNKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST