Transcript Information: R_Transcript_97208.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value9E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70504999395909
Replicate 20.36045150929267
Replicate 31.1797461422911
Condition 2: 8 Hour
Replicate 11.6814327860769
Replicate 20.47984724981085
Replicate 30.46742344945203
Condition 3: 24 Hour
Replicate 10.78825089193834
Replicate 20.66260434435211
Replicate 30.84544782052393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97208.p1 GENE.R_Transcript_97208~~R_Transcript_97208.p1 ORF type:complete len:233 (+),score=38.62,PseudoU_synth_1|PF01416.16|2.7e-07 R_Transcript_97208:93-701(+)
ATGGAATACCAGGCAGACAAGGTGAAAGTTCATCATCACTATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTTTTGATGAATATGCTCCAGAAGCCAGTCCTCCCGAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGGAAAGTTCAACAGCTGAAAGATAAGGGTTTACCTGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAGCTACTCATTGTAGGTATCACGCGCATTTCACCCGAATTTTTGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97208.p1 GENE.R_Transcript_97208~~R_Transcript_97208.p1 ORF type:complete len:233 (+),score=38.62,PseudoU_synth_1|PF01416.16|2.7e-07 R_Transcript_97208:93-701(+)
MEYQADKVKVHHHYAHTDPCKDRRWTAKECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTFDEYAPEASPPEEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQLLIVGITRISPEFLC*

Click here to download the sequence:
Link to NCBI Protein BLAST