Transcript Information: R_Transcript_97209.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value1.3E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4745890146908
Replicate 25.0147413940712
Replicate 37.7207977165603
Condition 2: 8 Hour
Replicate 18.0344244358148
Replicate 28.0858545943573
Replicate 39.2783902501532
Condition 3: 24 Hour
Replicate 16.8155990207247
Replicate 28.0738001295863
Replicate 310.162148604631


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97209.p1 GENE.R_Transcript_97209~~R_Transcript_97209.p1 ORF type:complete len:448 (+),score=83.93,PseudoU_synth_1|PF01416.16|4.2e-11,PseudoU_synth_1|PF01416.16|4.2e+03,PseudoU_synth_1|PF01416.16|6.3e-05 R_Transcript_97209:93-1346(+)
ATGGAATACCAGGCAGACAAGGTGAAAGTTCATCATCACTATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTTTTGATGAATATGCTCCAGAAGCCAGTCCTCCCGAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGACTGGTTGAGAGATCTATTGGGGCATTCGTTGATGACAGGAAAGTTCAACAGCTGAAAGATAAGGGTTTACCTGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAGGTATCACGCGCATTTCACCCGAATTTTTGTGCTAAATGGAGGAGATATCTTTACGTTTTTCCATTGGCTGAAGGAGATCAAGGGAAACAGAGTGGTCAAAGACTAGAGATGAGAAATGCGTGTGTTGGTGAAAGTCATGGATGGAAGCATAATGAACAAGCTGGGGACAACACTATAGAAACGGAGGACTCACTTGATGACAAGGACAAGATTAACATGGTGAAAAAACCAACGAGTTTCTCTGTTGCAAGAGTTGATCAACTATTGCGACATTTGGAAGGAAAATTGCTTTCTTACAGGATGTTTGCTCGAGACACCAAACCTTCGAGGAACACTGGTCCACCGACGGAGTGTTTTGTCTATCATTCTAGAGCAACTGAAGCCAGATTGCCATGCTCCAACAAGGACAAAGAAGATGCTGTCAAAGTTATGTGCATTGAGCTAGTAGCCAATCGTTTCTTACGGAGGATGGTTCGTGTGCTTGTTGCAACGGTAGTAAGGGAAGCCATCGCAGGCTCAGAAGACACCATTTTACTCAACCTGATGGAAGCTACTTGTCGACGGGCTACAGCACCTCCTGCGCCACCTGATGGTCTTTGCCTTGTAGATGTTGGTTATTCAGATTTTGATCCGAAAATATGCTTGATTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97209.p1 GENE.R_Transcript_97209~~R_Transcript_97209.p1 ORF type:complete len:448 (+),score=83.93,PseudoU_synth_1|PF01416.16|4.2e-11,PseudoU_synth_1|PF01416.16|4.2e+03,PseudoU_synth_1|PF01416.16|6.3e-05 R_Transcript_97209:93-1346(+)
MEYQADKVKVHHHYAHTDPCKDRRWTAKECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTFDEYAPEASPPEEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGLVERSIGAFVDDRKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQVSRAFHPNFCAKWRRYLYVFPLAEGDQGKQSGQRLEMRNACVGESHGWKHNEQAGDNTIETEDSLDDKDKINMVKKPTSFSVARVDQLLRHLEGKLLSYRMFARDTKPSRNTGPPTECFVYHSRATEARLPCSNKDKEDAVKVMCIELVANRFLRRMVRVLVATVVREAIAGSEDTILLNLMEATCRRATAPPAPPDGLCLVDVGYSDFDPKICLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST