Transcript Information: R_Transcript_97213.p1


Annotated TAIR IDAT5G35400.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13599416-13602240 | Reverse length=471
E-Value6.9E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.5837726607121
Replicate 30.24683984478613
Condition 2: 8 Hour
Replicate 10.26385630331083
Replicate 20.67468177969094
Replicate 30.39119850474972
Condition 3: 24 Hour
Replicate 11.0390386891849
Replicate 20.47532885540037
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97213.p1 GENE.R_Transcript_97213~~R_Transcript_97213.p1 ORF type:complete len:464 (+),score=81.59,PseudoU_synth_1|PF01416.16|4.4e-11,PseudoU_synth_1|PF01416.16|4.4e+03,PseudoU_synth_1|PF01416.16|6.7e-05 R_Transcript_97213:133-1524(+)
ATGCTCATACTGACCCTTGCAAAGACCGTCGATGGACTGCCAAGTAATCTAGCTATTCGTCATCATATTCATTGTGGCATATGCCTTCATAATCCCCATCAAGATCGAATTTTGTCATCTGGGTTTCCTTCAATTTCCCTTTTTTCTTTTTTGTTTTGTTTCTATAAGGGTTTTTCTGATTCAAAAGTTTCTGTGTTTTGTTGGTTCTTTTTGTTGTGTAGGGAGTGTTACCAGTATATGTATGACAAGCCTTGGGGACCAGTAAATGAATTTTATGGGGGTTTGGTTAATGGGCACTCCTCTTTGTCTGAGTTGTTTGGAGTTAAGGGAGAAGATGACGGTGGCATTGTCAACACTTTTGATGAATATGCTCCAGAAGCCAGTCCTCCCGAAGAACAATCAAGCAGATGGGCAAGAGTGACATTTAAAATAGTAGTGTCCTACCATGGCCAACATTTTGATGGGTGGCAGAAGCAGCCTGGTTTAAACACTGTTCAGGGACTGGTTGAGAGATCTATTGGGGCATTCGTTGATGACAGGAAAGTTCAACAGCTGAAAGATAAGGGTTTACCTGTTGAAGGAATGGCTGTTGTTGCTGGGCGTACAGACAAAGGGGTTACTGCACTCAAACAAGTTTGCTCTTTCTATACTTGGAGGAAGGATGTTTTAATTGACGACATCGAACATGCAGTCAACATAGCAGCACCTGGAAAACTCCAAGTTGTATCTGTATCTCAGGTATCACGCGCATTTCACCCGAATTTTTGTGCTAAATGGAGGAGATATCTTTACGTTTTTCCATTGGCTGAAGGAGATCAAGGGAAACAGAGTGGTCAAAGACTAGAGATGAGAAATGCGTGTGTTGGTGAAAGTCATGGATGGAAGCATAATGAACAAGCTGGGGACAACACTATAGAAACGGAGGACTCACTTGATGACAAGGACAAGATTAACATGGTGAAAAAACCAACGAGTTTCTCTGTTGCAAGAGTTGATCAACTATTGCGACATTTGGAAGGAAAATTGCTTTCTTACAGGATGTTTGCTCGAGACACCAAACCTTCGAGGAACACTGGTCCACCGACGGAGTGTTTTGTCTATCATTCTAGAGCAACTGAAGCCAGATTGCCATGCTCCAACAAGGACAAAGAAGATGCTGTCAAAGTTATGTGCATTGAGCTAGTAGCCAATCGTTTCTTACGGAGGATGGTTCGTGTGCTTGTTGCAACGGTAGTAAGGGAAGCCATCGCAGGCTCAGAAGACACCATTTTACTCAACCTGATGGAAGCTACTTGTCGACGGGCTACAGCACCTCCTGCGCCACCTGATGGTCTTTGCCTTGTAGATGTTGGTTATTCAGATTTTGATCCGAAAATATGCTTGATTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97213.p1 GENE.R_Transcript_97213~~R_Transcript_97213.p1 ORF type:complete len:464 (+),score=81.59,PseudoU_synth_1|PF01416.16|4.4e-11,PseudoU_synth_1|PF01416.16|4.4e+03,PseudoU_synth_1|PF01416.16|6.7e-05 R_Transcript_97213:133-1524(+)
MLILTLAKTVDGLPSNLAIRHHIHCGICLHNPHQDRILSSGFPSISLFSFLFCFYKGFSDSKVSVFCWFFLLCRECYQYMYDKPWGPVNEFYGGLVNGHSSLSELFGVKGEDDGGIVNTFDEYAPEASPPEEQSSRWARVTFKIVVSYHGQHFDGWQKQPGLNTVQGLVERSIGAFVDDRKVQQLKDKGLPVEGMAVVAGRTDKGVTALKQVCSFYTWRKDVLIDDIEHAVNIAAPGKLQVVSVSQVSRAFHPNFCAKWRRYLYVFPLAEGDQGKQSGQRLEMRNACVGESHGWKHNEQAGDNTIETEDSLDDKDKINMVKKPTSFSVARVDQLLRHLEGKLLSYRMFARDTKPSRNTGPPTECFVYHSRATEARLPCSNKDKEDAVKVMCIELVANRFLRRMVRVLVATVVREAIAGSEDTILLNLMEATCRRATAPPAPPDGLCLVDVGYSDFDPKICLIH*

Click here to download the sequence:
Link to NCBI Protein BLAST