Transcript Information: R_Transcript_97369.p1


Annotated TAIR IDAT5G12210.1
Annotated Gene NameRAB geranylgeranyl transferase beta subunit 1
Annotated Gene Symbol(s)AtRGTB1, RGTB1
Annotation TypeOrtholog
Chromosome Positionchr5:3947254-3949595 | Forward length=321
E-Value2.1E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1582800609042
Replicate 25.7794694525698
Replicate 39.3382867552259
Condition 2: 8 Hour
Replicate 18.6169768629678
Replicate 210.82983475932
Replicate 312.712452037275
Condition 3: 24 Hour
Replicate 112.718785188867
Replicate 29.9133393619668
Replicate 311.515830688925


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97369.p1 GENE.R_Transcript_97369~~R_Transcript_97369.p1 ORF type:complete len:287 (+),score=61.10,Prenyltrans|PF00432.17|7.8e+02,Prenyltrans|PF00432.17|7.7e-10,Prenyltrans|PF00432.17|1e-11,Prenyltrans|PF00432.17|3.2e-14,Prenyltrans|PF00432.17|3.9e-12,Prenyltrans|PF00432.17|2.1e-12,SQHop_cyclase_N|PF13249.2|39,SQHop_cyclase_N|PF13249.2|0.00043,SQHop_cyclase_N|PF13249.2|4.7e+02 R_Transcript_97369:422-1282(+)
ATGGAGCATCTTAGAATGAATGGTGCTTATTGGGGATTGACAACTCTGGATCTTTTGGGGAAGCTTCATGTTGTGGATCAAGATGAAGTTATATCATGGGTTATGGAGTGTCAACATGAATCTGGTGGATTTGGTGGTAATATTGGGCTTGATCCACATATTCTTTACACTCTCAGTGCAGTTCAAGTTTTAGCTCTTTTTGACAAGATAAATATTCTTGACATTGACAAGGTGTCAAGTTATATTGCAGGATTGCAGAATGACGATGGATCCTTTTCTGGGGACATGTGGGGGGAAGTTGATACAAGGTTTTCATATATTGCGATATGCTGTCTGTCATTGTTACGCCAGTTGGACAGAATTGATGTGGAGAAGGCAGTAAACTACATAGTAAGCTGCAAAAACCTTGATGGTGGATTTGGGAGCACACCTGGTCGGGAGTCTCATGCTGGACAGATATTTTGCTGTGTGGGTGCCCTTGCCATAACGGGTTCTCTTCACCATGTTGACAAGGACCTTCTGGGTTGGTGGTTGTGTGAGCGTCAAGTCAAATCAGGTGGTCTAAATGGTCGACCAGAAAAGCTTCCAGATGTATGCTACTCATGGTGGGTGCTTTCTAGCCTGATTATGATCGATAGAGTTCACTGGATTGACAGAGAGAAGCTTGTGAAATTCATATTAGACTGTCAGGACTTGGAGAAAGGAGGAATCTCAGACAGGCCAGATGATGCTGTCGATGTTTTTCATACCTACTTCGGAGTTGCTGGTCTCTCACTTCTACAGTATCCGGGAGTGACAGCCATAGATCCTGCCTATGCTTTACCAGTGGATGTGGTGAACAGGATACTGCTTAGATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97369.p1 GENE.R_Transcript_97369~~R_Transcript_97369.p1 ORF type:complete len:287 (+),score=61.10,Prenyltrans|PF00432.17|7.8e+02,Prenyltrans|PF00432.17|7.7e-10,Prenyltrans|PF00432.17|1e-11,Prenyltrans|PF00432.17|3.2e-14,Prenyltrans|PF00432.17|3.9e-12,Prenyltrans|PF00432.17|2.1e-12,SQHop_cyclase_N|PF13249.2|39,SQHop_cyclase_N|PF13249.2|0.00043,SQHop_cyclase_N|PF13249.2|4.7e+02 R_Transcript_97369:422-1282(+)
MEHLRMNGAYWGLTTLDLLGKLHVVDQDEVISWVMECQHESGGFGGNIGLDPHILYTLSAVQVLALFDKINILDIDKVSSYIAGLQNDDGSFSGDMWGEVDTRFSYIAICCLSLLRQLDRIDVEKAVNYIVSCKNLDGGFGSTPGRESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIDREKLVKFILDCQDLEKGGISDRPDDAVDVFHTYFGVAGLSLLQYPGVTAIDPAYALPVDVVNRILLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST