Transcript Information: R_Transcript_97370.p1


Annotated TAIR IDAT5G12210.1
Annotated Gene NameRAB geranylgeranyl transferase beta subunit 1
Annotated Gene Symbol(s)AtRGTB1, RGTB1
Annotation TypeOrtholog
Chromosome Positionchr5:3947254-3949595 | Forward length=321
E-Value8.3E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5112901651336
Replicate 24.5430591544037
Replicate 34.420598483468
Condition 2: 8 Hour
Replicate 13.7229970095227
Replicate 25.0998502444809
Replicate 38.8104308859188
Condition 3: 24 Hour
Replicate 17.1155776787621
Replicate 24.6432123980163
Replicate 38.8318808385726


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97370.p1 GENE.R_Transcript_97370~~R_Transcript_97370.p1 ORF type:complete len:171 (+),score=33.36,Prenyltrans|PF00432.17|4.2e+02,Prenyltrans|PF00432.17|2.5e-11,Prenyltrans|PF00432.17|4.3e-12,Prenyltrans|PF00432.17|1.1e-10,SQHop_cyclase_N|PF13249.2|13,SQHop_cyclase_N|PF13249.2|0.00012 R_Transcript_97370:425-937(+)
ATGGAGCATCTTAGAATGAATGGTGCTTATTGGGGATTGACAACTCTGGATCTTTTGGGGAAGCTTCATGTTGTGGATCAAGACGAAGTTATTTCATGGGTTATGGAGTGTCAACATGAATCTGGTGGATTTGGTGGTAATATTGGACATGATCCACATATTCTTTACACTCTCAGTGCAGTTCAAGTTTTAGCTCTTTTTGACAAGATAAATATTCTTGACATTGACAAGGTGTCAAGTTATATTGCAGGATTGCAGAATGACGATGGATCCTTTTCTGGGGACATGTGGGGGGAAGTTGATACAAGGTTTTCATATATTGCGATATGCTGTCTGTCATTGTTACGCCAGTTGGACAGAATTGATGTGGAGAAGGCAGTAAACTACATAGTAAGCTGCAAAAACCTTGATGGGGGATTTGGGAGCACACCTGGTGGGGAGTCTCATGCAGGACAGAGTATTATTTTGCTGTGTGGGTGCCCTTGCCATAACGGGTTCTCTTCACCATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97370.p1 GENE.R_Transcript_97370~~R_Transcript_97370.p1 ORF type:complete len:171 (+),score=33.36,Prenyltrans|PF00432.17|4.2e+02,Prenyltrans|PF00432.17|2.5e-11,Prenyltrans|PF00432.17|4.3e-12,Prenyltrans|PF00432.17|1.1e-10,SQHop_cyclase_N|PF13249.2|13,SQHop_cyclase_N|PF13249.2|0.00012 R_Transcript_97370:425-937(+)
MEHLRMNGAYWGLTTLDLLGKLHVVDQDEVISWVMECQHESGGFGGNIGHDPHILYTLSAVQVLALFDKINILDIDKVSSYIAGLQNDDGSFSGDMWGEVDTRFSYIAICCLSLLRQLDRIDVEKAVNYIVSCKNLDGGFGSTPGGESHAGQSIILLCGCPCHNGFSSPC*

Click here to download the sequence:
Link to NCBI Protein BLAST