Transcript Information: R_Transcript_97387.p1


Annotated TAIR IDAT4G39470.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18359735-18361165 | Reverse length=341
E-Value1.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0139813550229
Replicate 23.8837087475233
Replicate 34.5681066304466
Condition 2: 8 Hour
Replicate 15.0245561018914
Replicate 26.0749216562759
Replicate 36.4002788892694
Condition 3: 24 Hour
Replicate 17.6304850612311
Replicate 26.1831217120983
Replicate 35.6933335890773


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97387.p1 GENE.R_Transcript_97387~~R_Transcript_97387.p1 ORF type:complete len:346 (+),score=88.30,TPR_2|PF07719.13|2.5,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|0.0037,TPR_2|PF07719.13|13,TPR_16|PF13432.2|0.00017,TPR_16|PF13432.2|0.83,TPR_16|PF13432.2|0.15,TPR_16|PF13432.2|6.8e+02,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|6.1,TPR_11|PF13414.2|0.004,TPR_6|PF13174.2|70,TPR_6|PF13174.2|0.00051,TPR_6|PF13174.2|0.18,TPR_6|PF13174.2|3.3e+03,TPR_19|PF14559.2|7.9e-08,TPR_19|PF14559.2|13,TPR_14|PF13428.2|4.7e+03,TPR_14|PF13428.2|0.008,TPR_14|PF13428.2|1.5,TPR_14|PF13428.2|8.7,TPR_14|PF13428.2|5.9e+02,TPR_12|PF13424.2|0.0086,TPR_12|PF13424.2|0.088,TPR_12|PF13424.2|0.11,TPR_1|PF00515.24|34,TPR_1|PF00515.24|0.88,TPR_1|PF00515.24|2.7,TPR_1|PF00515.24|41,TPR_9|PF13371.2|8.7e-05,TPR_9|PF13371.2|10,PknG_TPR|PF16918.1|5,PknG_TPR|PF16918.1|0.00032,ANAPC3|PF12895.3|0.0041,ANAPC3|PF12895.3|6.9 R_Transcript_97387:121-1158(+)
ATGGCTTTCTTATCAACCACTACTCTCTCTCTTCATTCACATATCCAACTAAACTTTTTCAAATTCTCAAAGCATAATAATAACAATGTACCCATCAACAGAAAACCACATTTCACAACTTCATTTCGCACAATTCACCCAATAACTGCTTGTATCCCTACAAAGAACACTCAAACATCAAATTTGCTCCCTACCCACCAAAAAATTTCCAAACTTTTGGTCCAAAATGGTGTAAAATTGCTTGTAGGGTCAATGATTTTGGTGGGTTCTCTTAGTGTTAGGCCAGTAGTGGCTTCACCAGTTCAAAAAGGTGTGATCTTGGAGGAAAAGAGAGATACCCAGAATGAGAAAGTTGTTGAAGATGAAGACATGTGTGTGAAGTTACTGGAAACTGAGCCCAGAAATGTTGAGGCTTTGAAGGTGGTGGTGAATGGGAAGATGAGAAGGGGAAAGACAAAGGAAGCTGTGAAATATGTTGAGAGATTGATTGATATTGAACCTGATCAAGTTGAATGGAGGCTCTTGCAAGCCCTTTGTTATGACATGATGGGGCAGTTGAGTAAAGCTAAGAGATTGTTTAAGGATGTTCTCAAGGAGAGGCCTCTTTTGCTTAGAGCTTTGCATGGTTTGGCAATGGTGATGCACAAGAACCATGAAGGCCTTGCAGTTTTTGATATGTTGAACAGCGCTCTTGAACTTGCTTATCGTGAAAAACGAGTGACAGAAGAGAGAAACATTAAGATTTTGATTGCACAAATGCATCTGGTGAAGGGGGATCTGGATGAAGCTTTGAAGAAATATCAAGAACTTGTTAATGAGAACCCGCGAGATTTTCGTCCGTACTTGTGCCAGGGAATAATTTACAGCTTACAGGATAAGAAAAGGGAAGCAGAAGAACAGTTCGAGATATATAGAAGCCTTGTTCCAGAAGAATTTCCACAAAGAGGATTCCTTGAAGACGTTGTATTGGCTGCTAAAACAGAATCGAGAGAACAGCTGGAGAAGGAGTTTAAGGCTGAATTTTCATACAAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97387.p1 GENE.R_Transcript_97387~~R_Transcript_97387.p1 ORF type:complete len:346 (+),score=88.30,TPR_2|PF07719.13|2.5,TPR_2|PF07719.13|0.16,TPR_2|PF07719.13|0.0037,TPR_2|PF07719.13|13,TPR_16|PF13432.2|0.00017,TPR_16|PF13432.2|0.83,TPR_16|PF13432.2|0.15,TPR_16|PF13432.2|6.8e+02,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|6.1,TPR_11|PF13414.2|0.004,TPR_6|PF13174.2|70,TPR_6|PF13174.2|0.00051,TPR_6|PF13174.2|0.18,TPR_6|PF13174.2|3.3e+03,TPR_19|PF14559.2|7.9e-08,TPR_19|PF14559.2|13,TPR_14|PF13428.2|4.7e+03,TPR_14|PF13428.2|0.008,TPR_14|PF13428.2|1.5,TPR_14|PF13428.2|8.7,TPR_14|PF13428.2|5.9e+02,TPR_12|PF13424.2|0.0086,TPR_12|PF13424.2|0.088,TPR_12|PF13424.2|0.11,TPR_1|PF00515.24|34,TPR_1|PF00515.24|0.88,TPR_1|PF00515.24|2.7,TPR_1|PF00515.24|41,TPR_9|PF13371.2|8.7e-05,TPR_9|PF13371.2|10,PknG_TPR|PF16918.1|5,PknG_TPR|PF16918.1|0.00032,ANAPC3|PF12895.3|0.0041,ANAPC3|PF12895.3|6.9 R_Transcript_97387:121-1158(+)
MAFLSTTTLSLHSHIQLNFFKFSKHNNNNVPINRKPHFTTSFRTIHPITACIPTKNTQTSNLLPTHQKISKLLVQNGVKLLVGSMILVGSLSVRPVVASPVQKGVILEEKRDTQNEKVVEDEDMCVKLLETEPRNVEALKVVVNGKMRRGKTKEAVKYVERLIDIEPDQVEWRLLQALCYDMMGQLSKAKRLFKDVLKERPLLLRALHGLAMVMHKNHEGLAVFDMLNSALELAYREKRVTEERNIKILIAQMHLVKGDLDEALKKYQELVNENPRDFRPYLCQGIIYSLQDKKREAEEQFEIYRSLVPEEFPQRGFLEDVVLAAKTESREQLEKEFKAEFSYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST