Transcript Information: R_Transcript_97391.p1


Annotated TAIR IDAT4G39470.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18359735-18361165 | Reverse length=341
E-Value2.1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6505337033522
Replicate 20.8934595921829
Replicate 33.0461087228926
Condition 2: 8 Hour
Replicate 12.7351232121923
Replicate 22.25987635629
Replicate 31.2551645641757
Condition 3: 24 Hour
Replicate 11.5875079465966
Replicate 22.4636193441602
Replicate 31.8627833776083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97391.p1 GENE.R_Transcript_97391~~R_Transcript_97391.p1 ORF type:5prime_partial len:188 (-),score=60.51,TPR_2|PF07719.13|9.5,TPR_2|PF07719.13|0.21,TPR_2|PF07719.13|0.052,TPR_2|PF07719.13|5.6,TPR_6|PF13174.2|1.8e+02,TPR_6|PF13174.2|0.0011,TPR_6|PF13174.2|0.15,TPR_6|PF13174.2|1.4e+03,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|0.0068,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|0.057,TPR_14|PF13428.2|8.2,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|2.3e+02,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|0.017,TPR_16|PF13432.2|3.1e+02,TPR_19|PF14559.2|5.8e-06,TPR_19|PF14559.2|26,TPR_1|PF00515.24|4e+02,TPR_1|PF00515.24|0.78,TPR_1|PF00515.24|9.1,TPR_1|PF00515.24|18,TPR_9|PF13371.2|0.00019,TPR_9|PF13371.2|43,TPR_12|PF13424.2|0.094,TPR_12|PF13424.2|0.84 R_Transcript_97391:44-607(-)
AAGAGAGATACCCAGAATGAGAAAGTTGTTGAAGATGAAGAAATGTGTGTGAAGTTACTGGAAACTGAGCCCAGAAATGTTGAGGCTTTGAAGGTGGTGGTGAATGGGAAGATGAGAAGGGGAAAGACAAAGGAAGCTGTGATATATGTTGAGAGATTGATTGATATTGAACCTGATCAAGTTGAATGGAGGCTCTTGCAAGCCCTTTGTTATGATGTGATGGGGCAGTTGAGTAAAGCTAAGAGATTATTTAAGGATGTTCTCAAGGAGAGGCCTCTTTTGCTTAGAGCTTTGCATGGGGATCTGGATGAAGCTTTGAAACAATATCAAGAACTGGTTAATGAGAACCCGCGAGATTTTCGTCCGTACTTGTGCCAGGGAATAATTTACAGCTTACAGGATAAGAAAAGGGAAGCAGAAGAACAGTTCGAGATATATAGAAGCCTTGTTCCAGAAGAATTTCCACAAAGAGGATTCCTTGAAGACGTTGTATTGGCTGCTAAAACAGAATCGAGAGAACAGCTGGAGAAGGAGTTTAAGGCTGAATTTTCACACAAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97391.p1 GENE.R_Transcript_97391~~R_Transcript_97391.p1 ORF type:5prime_partial len:188 (-),score=60.51,TPR_2|PF07719.13|9.5,TPR_2|PF07719.13|0.21,TPR_2|PF07719.13|0.052,TPR_2|PF07719.13|5.6,TPR_6|PF13174.2|1.8e+02,TPR_6|PF13174.2|0.0011,TPR_6|PF13174.2|0.15,TPR_6|PF13174.2|1.4e+03,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|0.0068,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|0.057,TPR_14|PF13428.2|8.2,TPR_14|PF13428.2|1.7,TPR_14|PF13428.2|2.3e+02,TPR_16|PF13432.2|12,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|0.017,TPR_16|PF13432.2|3.1e+02,TPR_19|PF14559.2|5.8e-06,TPR_19|PF14559.2|26,TPR_1|PF00515.24|4e+02,TPR_1|PF00515.24|0.78,TPR_1|PF00515.24|9.1,TPR_1|PF00515.24|18,TPR_9|PF13371.2|0.00019,TPR_9|PF13371.2|43,TPR_12|PF13424.2|0.094,TPR_12|PF13424.2|0.84 R_Transcript_97391:44-607(-)
KRDTQNEKVVEDEEMCVKLLETEPRNVEALKVVVNGKMRRGKTKEAVIYVERLIDIEPDQVEWRLLQALCYDVMGQLSKAKRLFKDVLKERPLLLRALHGDLDEALKQYQELVNENPRDFRPYLCQGIIYSLQDKKREAEEQFEIYRSLVPEEFPQRGFLEDVVLAAKTESREQLEKEFKAEFSHKR*

Click here to download the sequence:
Link to NCBI Protein BLAST