Transcript Information: R_Transcript_97393.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3021752555501
Replicate 20.81967539162725
Replicate 31.9260920501269
Condition 2: 8 Hour
Replicate 11.1764980154833
Replicate 21.1415465204209
Replicate 31.9623362832851
Condition 3: 24 Hour
Replicate 11.723559101179
Replicate 21.3246401736083
Replicate 31.2488480151683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97393.p1 GENE.R_Transcript_97393~~R_Transcript_97393.p1 ORF type:internal len:333 (+),score=18.64,gag_pre-integrs|PF13976.2|5.1e-10,rve|PF00665.22|2.9e-06 R_Transcript_97393:1-996(+)
GGGCGAAATTACACCAACAACAACAATTCTGCGCCTTCTAGCAACAATCATACTGGCACCACTACTCAGGAAGGAGTGTTAGGTTCTCCCCCCGTCCCTTTGGTTTGTCGTGTCTGCTATTATCATGGTCACTCTGCATCTCAATGTCCTTTTAGATCCACCTCTGGTTCGACCACAATGCCTCCTCCAGTGTCCGCTCAATCCTTTGCCTCCATGACCACTGGTGAGACCACAAATGAGCCATGGTATCTGGATTCCGCTGCGGTAGCCCATATGACTCCTTCGGAAGGTAAGCTTATTTCTTCAAAATTTTATTCTGGTTCAAATTTTATAATTGTTGCCAATGGTACAAAGGTCCCAATAGCTAGGTCTGGTGTCTCTGTTTTACCTACCTCATCCAAGCCTCTAGTCCTTAAAGATGTGTATCAAGCCCCCAATCTTAAGCATAATTTGTTATCCATTCAGCGTCTCTGTCATGATAACAATTGCCTTGTTAACTTTGATTCTTCTACTGTCAAAATTAAGGACAAGAACACAGGAGCCATCCTACTTGAGGCACCCAACCAAGGAAGTGTCTACCCTATTTATCCAGTTCGTCTGCCTCTTCCAGCTTTTCTCAGTACCCAGAAGTCCAGTTCAGTTTGGCATAATCGTTTGGGTCATACGAGTCATCAAACTTTGGATTATCTCAGACGTAGTAATTTAATTCCGCATATTTCTCGTTTTCATAAAAACTGTGTTTCATGTAAGTTAGGTAAATCCTATAAACTGCCTTTTACAACTGTTAGCCATGTTACTACCAAACCCTTACAGTTAATACATTCAGATGTTTGGCAATCCCCAATTATCTCAAATCTTGGTTTTAAATATTATGTTGTCTTTGTGGATGATTATTCCAGATTTACTTGGCTTTATCCAATGAAACGCAAAAATGAGGTGTTTGATATTTTTCGTCGTTTTAAATACATGGTCGAAACCTTTTTGATTGCAAAATCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97393.p1 GENE.R_Transcript_97393~~R_Transcript_97393.p1 ORF type:internal len:333 (+),score=18.64,gag_pre-integrs|PF13976.2|5.1e-10,rve|PF00665.22|2.9e-06 R_Transcript_97393:1-996(+)
GRNYTNNNNSAPSSNNHTGTTTQEGVLGSPPVPLVCRVCYYHGHSASQCPFRSTSGSTTMPPPVSAQSFASMTTGETTNEPWYLDSAAVAHMTPSEGKLISSKFYSGSNFIIVANGTKVPIARSGVSVLPTSSKPLVLKDVYQAPNLKHNLLSIQRLCHDNNCLVNFDSSTVKIKDKNTGAILLEAPNQGSVYPIYPVRLPLPAFLSTQKSSSVWHNRLGHTSHQTLDYLRRSNLIPHISRFHKNCVSCKLGKSYKLPFTTVSHVTTKPLQLIHSDVWQSPIISNLGFKYYVVFVDDYSRFTWLYPMKRKNEVFDIFRRFKYMVETFLIAKS

Click here to download the sequence:
Link to NCBI Protein BLAST