Transcript Information: R_Transcript_97454.p1


Annotated TAIR IDAT5G65200.1
Annotated Gene Nameplant U-box 38
Annotated Gene Symbol(s)PUB38, ATPUB38
Annotation TypeOrtholog
Chromosome Positionchr5:26048173-26049843 | Reverse length=556
E-Value9E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.552485745139
Replicate 238.499345947223
Replicate 344.730319474098
Condition 2: 8 Hour
Replicate 125.515043158688
Replicate 229.762294569704
Replicate 324.382286069767
Condition 3: 24 Hour
Replicate 132.526910765696
Replicate 225.145312675597
Replicate 328.787506514641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97454.p1 GENE.R_Transcript_97454~~R_Transcript_97454.p1 ORF type:complete len:571 (+),score=38.33,Arm|PF00514.19|0.012,Arm|PF00514.19|0.0022,Arm|PF00514.19|2.3e-05,Arm|PF00514.19|0.1,Arm|PF00514.19|0.04,U-box|PF04564.11|1.8e-08,HEAT_2|PF13646.2|1.4e+04,HEAT_2|PF13646.2|0.066,HEAT_2|PF13646.2|0.00013,HEAT_2|PF13646.2|2.4 R_Transcript_97454:108-1715(+)
ATGGGAGGAAATGGAAAGTTTCTAAAATGGAAGGTTTCCTTCTACAGGTCTTCCCAAACCAGCTCACCACCCTCACCACCTCCCGAGTACATCTGCCCTATCTGCACTGACGTCATCTCCGACCCTGTGGTTGTCGGCTCGGGTCACAGCCTGGACCGCCTCTGCGCTCAAGTCTGTCTCGATTACCGCTTCACCCCAATTCTCTCAGACGGGTCTCGCCCGGACTTTTCAGGCCAGCTATTTCCCAATTTAGCCTTGAAATTGGCCATCCAGAACTGGTGCTCACAAAACGGCGTCGCTTTGCCGCCCTCGAAGGATTACACCGCCGTCGAGAAAATCGTCAAAGGCTTCATTGAGAAGGACCTGATTCGTCCGTCGGAGAGGTTTTTAATCGACGCCATCCCTGAGAAGCCTGATCCTGACGTGTCACACGCTGTCACCGTGTTGACTCACCGAGTCAACCGATTCGACCTCAACTCGTCCTCCAGCTCAACCTCCTCTGAGGAGTCCGTCATTGCCGTTCCTTCTAGTCCACTCACTCCTCTGCCGTTCACCACCAAGCCTGCCTGCTGGTCTTCTTACACGTCATCGTCTTCTTCGTCGGAGATCCTGAACCCTAACCCTAGCTTCGATGAGGAATTTGTAGCGAAATTCAAGAGCTGTGACCCGTACGAGCAGGAGCAAGCTGCGATTGCGTTGAGGAAGGCTACGAGGAACGATGAAGAAGCTCGAGTTTCTCTCTGTACTCCGAGAATGTTGACGGCGTTGATGTCGCTGTTGCTTTCGAGCTACGAGAAGGTTCAGGCGAACGCCATAGCTGCGCTTGTGAATCTCTCGCTTGAGAAGGAGAACAAGATCAAGATCGTCCGGTCTGGAGTTCTTCCGAATGTGATCGGTTTGTTGAAAGGAAGGTCGCCTGAGTGTCAGGAACATGCCGCCGGTGCGATCTTCTCGTTGTCGTTGGAGGATGATAACAAGACCGCCATTGGAGTACTCGGAGCTTTGCCGCCGTTGCTGCATTGCTTGACTCGGTCGGAATCGGAGCGGACTCGGTCCGACTCGGCCTTGGCGTTGTATCATCTCTCGCTCGTTCACAGCAACCGAGTGAAGCTCGTTAAACTCGGAGCGATACCGATCTTGTTGGCGGTGTTAGGGTCGCAGAGTGAGGGGATTGCCGGGAGAGTGCTGCTCGTGCTGTGTCAACTCGCAGCGAGTTCGGAGGGCAAGGCGGCGATGTTGGATGGGAATGCGGTAGAGCATCTGGTGGCGATGTTAAGGAGAAAGAGGAACGAGTTCGAGTCCGAGTCAACTCGGGAGAACTGTGTCGCCGCGCTTTACGCGCTGAGTCATGGGAGTATGAGGTTCAAGGCGCTGGCCAAGGAGGCCCGGGCGGCCGAGGTCCTCAAGGAGGTCGAGGAGAACGGGAGCGAGCGGGCTAAGGAGAAGGCCAGGAGGATCTTATTATTGCTCAAAGCGCGGCCGCAGGATATCCATAGTGGCGGTGCTGAGGAGGTTGATTGGGAGGCTATTCTTGGATCGGATGGACTGAGTCGGACTCGCCACCGAGTTGTGGGTGCGGGCGGTGTTGGTAAATCCACCGAGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97454.p1 GENE.R_Transcript_97454~~R_Transcript_97454.p1 ORF type:complete len:571 (+),score=38.33,Arm|PF00514.19|0.012,Arm|PF00514.19|0.0022,Arm|PF00514.19|2.3e-05,Arm|PF00514.19|0.1,Arm|PF00514.19|0.04,U-box|PF04564.11|1.8e-08,HEAT_2|PF13646.2|1.4e+04,HEAT_2|PF13646.2|0.066,HEAT_2|PF13646.2|0.00013,HEAT_2|PF13646.2|2.4 R_Transcript_97454:108-1715(+)
MGGNGKFLKWKVSFYRSSQTSSPPSPPPEYICPICTDVISDPVVVGSGHSLDRLCAQVCLDYRFTPILSDGSRPDFSGQLFPNLALKLAIQNWCSQNGVALPPSKDYTAVEKIVKGFIEKDLIRPSERFLIDAIPEKPDPDVSHAVTVLTHRVNRFDLNSSSSSTSSEESVIAVPSSPLTPLPFTTKPACWSSYTSSSSSSEILNPNPSFDEEFVAKFKSCDPYEQEQAAIALRKATRNDEEARVSLCTPRMLTALMSLLLSSYEKVQANAIAALVNLSLEKENKIKIVRSGVLPNVIGLLKGRSPECQEHAAGAIFSLSLEDDNKTAIGVLGALPPLLHCLTRSESERTRSDSALALYHLSLVHSNRVKLVKLGAIPILLAVLGSQSEGIAGRVLLVLCQLAASSEGKAAMLDGNAVEHLVAMLRRKRNEFESESTRENCVAALYALSHGSMRFKALAKEARAAEVLKEVEENGSERAKEKARRILLLLKARPQDIHSGGAEEVDWEAILGSDGLSRTRHRVVGAGGVGKSTEF*

Click here to download the sequence:
Link to NCBI Protein BLAST