Transcript Information: R_Transcript_97466.p1


Annotated TAIR IDAT5G38730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15510901-15512691 | Forward length=596
E-Value4.5E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4515820544698
Replicate 21.1446024077028
Replicate 31.9121467499344
Condition 2: 8 Hour
Replicate 11.8353970318208
Replicate 22.0570487554072
Replicate 33.1541129187044
Condition 3: 24 Hour
Replicate 12.7377282895048
Replicate 22.2167977419831
Replicate 32.7965551133174


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97466.p1 GENE.R_Transcript_97466~~R_Transcript_97466.p1 ORF type:complete len:587 (+),score=105.12,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|6.5e-10,PPR_2|PF13041.2|7.2e-14,PPR_2|PF13041.2|5.2e-16,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|4e-16,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|3.5e-15,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|0.28,PPR_1|PF12854.3|97,PPR_1|PF12854.3|5.6e-13,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|2.8e-10,PPR_1|PF12854.3|3e-13,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.0049,PPR_1|PF12854.3|0.29,PPR|PF01535.16|1e+03,PPR|PF01535.16|18,PPR|PF01535.16|0.3,PPR|PF01535.16|3e-09,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|4.7e-07,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|49,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.021,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|24,PPR_3|PF13812.2|9.2e-06,PPR_3|PF13812.2|9.7e-05,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|6.3e+03,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.046,MRP-S27|PF10037.5|0.0022,MRP-S27|PF10037.5|1.4e+03,MRP-S27|PF10037.5|1.3 R_Transcript_97466:281-2041(+)
ATGGCTAGCTTAGCTTCTATCACTAAGGACACCCAACTAGTTAAATCTCTATCTGCAGTTGTACTAAAGGGAAACTGGTACCAACTTTTGAAACCCCAAATTGCTTCTTGTTTGAGTTCAGTAACAGTAGAGAAAGTGCTGTCACAGCTGTCATTAGATTGTTCTGATTACTGGGATTTTTATGAGTGGGTTGAGAGAATTCCAGGTTATAAGCATTCTCTTGAAGCAACCTGGACTATGATTCACTTCCTTACTAAACAGAAGCAGTTCAAAGTTGCTCAGAACTTGCTGAATAAGATTGCTCTTAAGGATTATTTATCCTCACCCACTGTTTTGAATGCACTCCTTGGGACCCACAATGACCCAGAATTCAATTCTCAGATTTTGAGTTGGTTGGTGATATTTTATGCTGATTCTAGGATGACCCAAGATGCAATTCAGGTGTTTGAGTATATGAAAGTCAATAGGTTTAAGCCTCATTTACCTGCTTGTACTGTGCTTTTGAATTCTCTGATCAAGGCTGGGTTGACTGCTACCATGTGGAAGATGTATAGGAAGATGTTGAGTCTTGGGGTGTCGCCGAATCTTTATGTGTATAATGTGTTGATTCATGGTTGTTGTAAGTCGGGTAATGTGGAGAAAGCAGAAGAATTGTTGAGTGAGATGGAAATGAGGTACATATTCCCTGATCTCTTCACTTACAACACGCTGATTTCATTGTATGTGAAGAAAGGTAAGCACTATGAAGCTATGTCGGTCCAAGATAGGATGGAAAAAGCTGGTGTGGCTCCGGATATTGTGACTTACAATAGTCTTATATATGGATATTGTAGAGAAGCCAGGATGAGGGAGGCACTAATACTTTTTAGTGAAATTAAAGGTGCCAGTCCTAATGTTGTGACTTATACCACTTTGATTGATGGATACTGTCGGGCTAATGACCTGAATGAAGCTTTGAGATTGCAGCAAGTGATGGAGTCTAAAGGTCTCTATCCTGGGGTTGTTACTTATAATTCGATCCTCCGTAAGCTATGCAAGGAAGGTAGGATAAGGGATGCAAACAAGCTCCTAAATGAGATGAGTGCAAAGAAGGTGGAACCTGACAACATCACGTGCAATACACTGATTAATGCTTATTGTAAAATAGGAGATATGCGGTCTGCCTTGAGGGTCAGAAATAAGATGTTAGATGCTGGGTTGAAGATTGATCAGTTTACTTTCAAGGCACTGATACATGGTTTTTGCAATGCCCGGGAGATGGATAATGCAAAGGAGCTCATTTTTGAAATGCTTAATGCTGGATTTTCTCCAAGTTTTTGCACCTATTCATGGATTGTTGACGGTTACTGTTGCCAGGGTAATGAGGAAGCAATAGTACGATTAGCAGATGAGCTTGCAGGCAGAGGATTTTTTGTTGATATTTCAGTGTATCGGGCTCTGATTAGAAGTCTTTGTCAGAAGGATAGAATTGAATTTTCTAGAAGGTTATTTAATTGTATGGAAGAGAAAGGTATCAAGGGAGACAGTCTTATATACAGTAGCTTGGCATTTGCTTACTTTAAAGCAGGGAAGGCAAGGCTGGCTTCAGATTTACTGGATGAGATGTACAAGAGAAGGTTGAACATAACCCTGAAAATTTATAGGTGTTTCAGCGCTTCAAATGCTGGTGAGAACAACATTTTAAGGCTCTTTTGGGATCACTTGGGGCAGAGAAATCTTATCTCAAAGAATGTTTACAAGCATATCCAAGAGCTAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97466.p1 GENE.R_Transcript_97466~~R_Transcript_97466.p1 ORF type:complete len:587 (+),score=105.12,PPR_2|PF13041.2|3.4e+02,PPR_2|PF13041.2|0.052,PPR_2|PF13041.2|6.5e-10,PPR_2|PF13041.2|7.2e-14,PPR_2|PF13041.2|5.2e-16,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|4e-16,PPR_2|PF13041.2|1.4e-16,PPR_2|PF13041.2|3.5e-15,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.00011,PPR_2|PF13041.2|0.28,PPR_1|PF12854.3|97,PPR_1|PF12854.3|5.6e-13,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|2.8e-10,PPR_1|PF12854.3|3e-13,PPR_1|PF12854.3|1.5e-10,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.0049,PPR_1|PF12854.3|0.29,PPR|PF01535.16|1e+03,PPR|PF01535.16|18,PPR|PF01535.16|0.3,PPR|PF01535.16|3e-09,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|4.7e-07,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|49,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.021,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|20,PPR_3|PF13812.2|24,PPR_3|PF13812.2|9.2e-06,PPR_3|PF13812.2|9.7e-05,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.00034,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.52,PPR_3|PF13812.2|6.3e+03,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.046,MRP-S27|PF10037.5|0.0022,MRP-S27|PF10037.5|1.4e+03,MRP-S27|PF10037.5|1.3 R_Transcript_97466:281-2041(+)
MASLASITKDTQLVKSLSAVVLKGNWYQLLKPQIASCLSSVTVEKVLSQLSLDCSDYWDFYEWVERIPGYKHSLEATWTMIHFLTKQKQFKVAQNLLNKIALKDYLSSPTVLNALLGTHNDPEFNSQILSWLVIFYADSRMTQDAIQVFEYMKVNRFKPHLPACTVLLNSLIKAGLTATMWKMYRKMLSLGVSPNLYVYNVLIHGCCKSGNVEKAEELLSEMEMRYIFPDLFTYNTLISLYVKKGKHYEAMSVQDRMEKAGVAPDIVTYNSLIYGYCREARMREALILFSEIKGASPNVVTYTTLIDGYCRANDLNEALRLQQVMESKGLYPGVVTYNSILRKLCKEGRIRDANKLLNEMSAKKVEPDNITCNTLINAYCKIGDMRSALRVRNKMLDAGLKIDQFTFKALIHGFCNAREMDNAKELIFEMLNAGFSPSFCTYSWIVDGYCCQGNEEAIVRLADELAGRGFFVDISVYRALIRSLCQKDRIEFSRRLFNCMEEKGIKGDSLIYSSLAFAYFKAGKARLASDLLDEMYKRRLNITLKIYRCFSASNAGENNILRLFWDHLGQRNLISKNVYKHIQELV*

Click here to download the sequence:
Link to NCBI Protein BLAST