Transcript Information: R_Transcript_97494.p3


Annotated TAIR IDAT5G06140.1
Annotated Gene Namesorting nexin 1
Annotated Gene Symbol(s)SNX1, ATSNX1
Annotation TypeOrtholog
Chromosome Positionchr5:1856212-1858752 | Reverse length=402
E-Value2.8E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.561819081364
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.58844425897857
Replicate 31.7514712002128
Condition 3: 24 Hour
Replicate 10
Replicate 23.2889421152615
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97494.p3 GENE.R_Transcript_97494~~R_Transcript_97494.p3 ORF type:complete len:114 (+),score=12.43,PX|PF00787.20|3.9e-13 R_Transcript_97494:287-628(+)
ATGCAGCAAAACCAGAGAAGTTCGTCAGGTTCATCATCTCAAAGCCCTAGATCCCCTCATTCTCAACCCTTTCTCTCTGTTTCAGTCACTGATCCCGTCAAATTGGGCAATGGCGTCCAAGCTTACATCTCTTACCGGGTCATCACCAAGACCAATTTACCAGATTATCAAGGGCCAGAAAAGATTGTCATCCGACGATACAGCGATTTTGTTTGGCTACGTGATCGTCTTTTTGAGAGATACAAAGGCATTTTCATACCGCCACTTCCCGAGAAAAGTGCTGTTGGTATGGATTGCCTGTTATTATGTTGTGAGAAACTGGTTAGTTGTCTGTTTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97494.p3 GENE.R_Transcript_97494~~R_Transcript_97494.p3 ORF type:complete len:114 (+),score=12.43,PX|PF00787.20|3.9e-13 R_Transcript_97494:287-628(+)
MQQNQRSSSGSSSQSPRSPHSQPFLSVSVTDPVKLGNGVQAYISYRVITKTNLPDYQGPEKIVIRRYSDFVWLRDRLFERYKGIFIPPLPEKSAVGMDCLLLCCEKLVSCLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST