Transcript Information: R_Transcript_97572.p1


Annotated TAIR IDAT5G04220.2
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, SYT3
Annotation TypeOrtholog
Chromosome Positionchr5:1155985-1158620 | Reverse length=540
E-Value2.7E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.616295678375
Replicate 23.5762929280508
Replicate 34.4051418454139
Condition 2: 8 Hour
Replicate 15.4263546861111
Replicate 27.4126732843491
Replicate 37.480059321588
Condition 3: 24 Hour
Replicate 16.1389008337817
Replicate 25.0088866344901
Replicate 37.0553773349706


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97572.p1 GENE.R_Transcript_97572~~R_Transcript_97572.p1 ORF type:complete len:546 (+),score=103.11,C2|PF00168.26|3.2e-23,C2|PF00168.26|4.6e-16,SMP_LBD|PF17047.1|2e-16 R_Transcript_97572:243-1880(+)
ATGGGATTTGTAAGTACTTTGTTAGGAATTCTGGGTTTTGGCATTGGGCTCCCTTTTGGGCTCTTTGTGGGGTTTTTCTTTCTTGTGTATTCCAAGCCTAAAGAGGTCAAGGAGCCAGAAATTACGCCACTTCATGAATTGGATACAAGTGCTCTGCAAGAACTTCTTCCTGAGATGCCGAATTGGATCAAAAGTCCTGATTATGAGCGAGTTGATTGGCTAAACAAGTACATATTGGATATGTGGCCTTTTCTTGATAAGGCTATTTGCAACACAATTAGAAGCACAGTAAAACCTATAGTTGCAGATTACATTGGAAAATATCAGATAAAGGCCATTGAGTTTGAGAAACTAAGTCTTGGAACTCTGCCACCCGTCTTTCACGGTATGAAAGTTTATGAAACCAATGAGAACCAACTAGTCTTGGAGCCTGCAATTAAATGGGCAGGAAATCCCAACATTGTCGTAGCTGTGACATTGATGTCTGTACAGATCAGATTTCAGCTTGTGGATCTACAGGTATTTGTTACTCCGAGGGTACACTTGAAACCCCTTGTTCCAAGCTTTCCATGTTTTGCGAGCATAGTTGTCTCATTAATCGAAAAGCCACATGTAGATTTTGGATTGAAAGTTCTGGGAGGAGATGTTATGTCCATACCTGGTCTTTATCGCTTTGTTCAGGAAACTATCAAGAAACAAGTTGCTAATCTCTACCACTGGCCTCAATTTCTTGAAATTCCCATTCTCGATACTTCAACAGTGGCTGTCCAGAAACCAGTTGGCATATTACATGTAAACATTGTACGTGCAATGAATCTTTTGAAGATGGACTTTATAGGGGCATCTGATCCTTATGTCAAGTTAAAGCTTAGTGGTGAAAAGCTGCCTGCAAAGAAAACATCAATCAAGAGGAGGAATCTGAATCCAGAGTGGAATGAAAAGTTTAAGCTCATTATCAAGGATCCAGAAACCCAAGTTCTTGAACTGCATGTGTTCGACTGGGACAAGGTTGGAGGACATGATAACTTGGGGGTGCAACTAGTTCCTTTGAAGCAGCTTAGTCCCCATGAAACAAAGGAATTCACATTAGATTTGCTTAAGAGTTTTAATATGAAGGATCCACATAATAAGAAGCCACGAGGGCAGCTTGTGTTGGAACTTACCTTCGATCCGTTCAAGGATGAGAATGATGGCTTCACCGAAGGGGATGAACTGCAGAGGAAACAAAGTAGCATAGCAAGAGAAATAGCAGAAGCATCAATGAGTGAAGGGGCACTTTTGGTTACAGTCATAGAAGCCGAGGATCTAGAGGCCGGGGAGCATCGGATCAACCCATATGCTCAAATTTTATTCAGAGGAGAGCAAAAGAGGACAAAGAGAATAAGGAAGAGTCGTAGTCCACGATGGAATGAACAATTCGTATTTATGCTTGACGAGCCACCTTTGGAGGATAAGATGCATATTGAAGTCTTCAGCTCACGTAGAACATTTCGTTTGATTAGGCAGAGAGAATCGCTTGGATTTGTGGATATTAATCTGGCTGACGTTGTGAACAATGGAAGAATCAACGAAAAGTATTATCTGATCGAGTCGAGGAATGGGAAGCTGCAAGTTGAGTTAGAATGGCAGACTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97572.p1 GENE.R_Transcript_97572~~R_Transcript_97572.p1 ORF type:complete len:546 (+),score=103.11,C2|PF00168.26|3.2e-23,C2|PF00168.26|4.6e-16,SMP_LBD|PF17047.1|2e-16 R_Transcript_97572:243-1880(+)
MGFVSTLLGILGFGIGLPFGLFVGFFFLVYSKPKEVKEPEITPLHELDTSALQELLPEMPNWIKSPDYERVDWLNKYILDMWPFLDKAICNTIRSTVKPIVADYIGKYQIKAIEFEKLSLGTLPPVFHGMKVYETNENQLVLEPAIKWAGNPNIVVAVTLMSVQIRFQLVDLQVFVTPRVHLKPLVPSFPCFASIVVSLIEKPHVDFGLKVLGGDVMSIPGLYRFVQETIKKQVANLYHWPQFLEIPILDTSTVAVQKPVGILHVNIVRAMNLLKMDFIGASDPYVKLKLSGEKLPAKKTSIKRRNLNPEWNEKFKLIIKDPETQVLELHVFDWDKVGGHDNLGVQLVPLKQLSPHETKEFTLDLLKSFNMKDPHNKKPRGQLVLELTFDPFKDENDGFTEGDELQRKQSSIAREIAEASMSEGALLVTVIEAEDLEAGEHRINPYAQILFRGEQKRTKRIRKSRSPRWNEQFVFMLDEPPLEDKMHIEVFSSRRTFRLIRQRESLGFVDINLADVVNNGRINEKYYLIESRNGKLQVELEWQTT*

Click here to download the sequence:
Link to NCBI Protein BLAST