Transcript Information: R_Transcript_97724.p1


Annotated TAIR IDAT3G15200.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5117489-5119060 | Reverse length=523
E-Value2E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3532405532999
Replicate 24.8720697098592
Replicate 34.8513348500139
Condition 2: 8 Hour
Replicate 13.4722128930716
Replicate 23.0061590688887
Replicate 34.9139719359059
Condition 3: 24 Hour
Replicate 15.2849464152173
Replicate 24.5491510050546
Replicate 35.5223122322375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_97724.p1 GENE.R_Transcript_97724~~R_Transcript_97724.p1 ORF type:complete len:543 (+),score=86.79,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00023,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|8.8e-18,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|6.7e-05,PPR_2|PF13041.2|0.00025,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|8.7e-10,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.4e-05,PPR|PF01535.16|0.0012,PPR|PF01535.16|24,PPR|PF01535.16|74,PPR|PF01535.16|0.011,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|67,PPR|PF01535.16|2.1,PPR|PF01535.16|1.1e-06,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|23,PPR_3|PF13812.2|53,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.9e-07,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|87,PPR_3|PF13812.2|0.0023 R_Transcript_97724:297-1925(+)
ATGCACCCTCATTGTCAACACTTCACAACCCTTTTCAGGGTGTTTATCCAACGGAATTTCAAATTCAAATTAAGGGCAGTAACCCATCATCAATGTCACAGCTTTCATTGCTTATTTCCTCCATATTCTCTCTCCAACCCAGTAAAGTTTCGTGCTTTCCATCTCAAAGGAAATCCAGCTTTCATCAATCAAGATCCTAGATTTTCTCAATTGCCCAAAAGTTCTGCAGAAAATGAAACTACCCACATTGAGAAGATTGCATCAAGGGTTCAGAATTTGCTCAAAGAACTCTCAAATAGCTCAGACGAGGAACTTGGCCAAGTTCTTGATATTGATTGTGGTGTATCACTTTGTGAAGACTTGGTTCTTAATATAATCAGACGACATAGTTCAGATTGGAAACCAGCGTTTAGCTTCTTCAGATGGGTCTGTACAGGTGCAAATAGAAATGGGTATTTGCCAAAATCAGAGGCTTACAATGAAATGCTAGGGATACTGGGTAAAATGAAGCGGTTCGAGGAGGTCGACCAAGTGTTCGATGAAATGTCTCAAAGAGGAGTTGTTAATGAGAGGTCTTATGGGATTGTGGTTCATAGGTATGCTGCTGCTCATAGAATTGATGATGCCATTAAGTTTTTCTATAAAAGGAAGGAGTATGGACTTGAGCTTGATTTGGTTGCTTTTCAAACTCTTTTGTTGTCCTTGTGCCGGTACAAACATGTTGAGGCTGCTGAATTATTGTTCCATGCGAAGAAAGGCGAGTTTGAGTATGATATTAAGACTTGGAATATCATCCTTAATGGGTGGTGTGTACTAGGGAATTTACGCGAAACCAAGAGGTTTTGGAGGGAGATAATCCGTTCCAAATGCAGACCAGATCGGTTCACATGTGGAACTTTCATAAATGCATTATGCAAGTCTGGCAAAATTAGCACTGCGGTCAAGTTGTTTCATGCTATGTGGGAAAAGGATTGCACCCCAGATGTTGTAATTTGCAACAGTGTGATTGATGGGCTGTGTTTCAAGAAGAGGATACCTGAAGCCCTTGAAATATTTCAAAAGATGCATAGTAAGGATTGCGAGCCAAATGTGGTGACGTATAATTGCCTGATCAAGCACTTGTGTAAGATTCAAAGGATGGAAGTGGTTTTTGAACTTCTGGGTGAGATGGAGGAGAAAGGAAAAAACTGTGTACCCAATGCTACGACTTATAGTCACTTGTTGAATTCGTCAAGAAGACCAGAAGAAGTTTCGATTCTGCTGGAAAGAATGAAGAATGTTGGATGTGAGATGACTGGAGACACATATAATTTGCTGCTGAGGTTGTATATGAAATGGTATTGTGAGGAACAAGTTCAATCAACTTGGACTGAGATGTTGAGAGAAGGTATGGGACCTGACCAACGTTCTTACACAATCATGGTTCATGGTTTGCATGACCAAGGGAGAATGGAAGATGCACTGAAATATTTTCATGAAATGAAGTCAAAGGGCATTGTGCCAGAACCGAGGACAATATTGTTGGTTGATGCCATGAACGATAAGTTGAAGGAGCGAGGACCAGAAAATACAATCAACACGAAGTTCTCCAGGCATGCCCGTAGGAGAGGCAGGAAGAACACCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_97724.p1 GENE.R_Transcript_97724~~R_Transcript_97724.p1 ORF type:complete len:543 (+),score=86.79,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00023,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|8.8e-18,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|6.7e-05,PPR_2|PF13041.2|0.00025,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|8.7e-10,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.4e-05,PPR|PF01535.16|0.0012,PPR|PF01535.16|24,PPR|PF01535.16|74,PPR|PF01535.16|0.011,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|67,PPR|PF01535.16|2.1,PPR|PF01535.16|1.1e-06,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|23,PPR_3|PF13812.2|53,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.9e-07,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|87,PPR_3|PF13812.2|0.0023 R_Transcript_97724:297-1925(+)
MHPHCQHFTTLFRVFIQRNFKFKLRAVTHHQCHSFHCLFPPYSLSNPVKFRAFHLKGNPAFINQDPRFSQLPKSSAENETTHIEKIASRVQNLLKELSNSSDEELGQVLDIDCGVSLCEDLVLNIIRRHSSDWKPAFSFFRWVCTGANRNGYLPKSEAYNEMLGILGKMKRFEEVDQVFDEMSQRGVVNERSYGIVVHRYAAAHRIDDAIKFFYKRKEYGLELDLVAFQTLLLSLCRYKHVEAAELLFHAKKGEFEYDIKTWNIILNGWCVLGNLRETKRFWREIIRSKCRPDRFTCGTFINALCKSGKISTAVKLFHAMWEKDCTPDVVICNSVIDGLCFKKRIPEALEIFQKMHSKDCEPNVVTYNCLIKHLCKIQRMEVVFELLGEMEEKGKNCVPNATTYSHLLNSSRRPEEVSILLERMKNVGCEMTGDTYNLLLRLYMKWYCEEQVQSTWTEMLREGMGPDQRSYTIMVHGLHDQGRMEDALKYFHEMKSKGIVPEPRTILLVDAMNDKLKERGPENTINTKFSRHARRRGRKNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST