Transcript Information: R_Transcript_98019.p1


Annotated TAIR IDAT5G12340.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3992948-3993610 | Reverse length=220
E-Value2.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.485025293028
Replicate 210.666120611479
Replicate 313.744042557692
Condition 2: 8 Hour
Replicate 114.887405887925
Replicate 221.734777149632
Replicate 322.144964956872
Condition 3: 24 Hour
Replicate 19.1831228910816
Replicate 27.9398932006078
Replicate 39.2803867872445


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_98019.p1 GENE.R_Transcript_98019~~R_Transcript_98019.p1 ORF type:complete len:250 (+),score=31.85,DUF4228|PF14009.2|1.6e-25 R_Transcript_98019:215-964(+)
ATGGGGAATACATATGCAGGAGCAAAGCTTATTAACGATGGTGCAGTATCATGCTTCAAATTCAAAGGAGTTCCACTACTAATAATAGCAAAGCCAACCATAAAGTTGATCTTATGTGAAGGAAGCACAAGGGTTTTGAAGCATAGAAGAAAAATCAAAGCTGGGGAAATCATGTTTCAATTTCCAGATTGTGTTATTTGCCATGCAGATTCCTTCTTCCTAGGACGTCCAATCCCAATCCTAGCCATCCACGACCACCTAGTAGCTGGAAACTCGTATTTCATCCTCCCTCTGGATCGTCTCCCCCCAACAGAAGGCCCTGGTGGTGGGGTCCTCTCTGCGGCCTCCTTATCCTCCCTTGGTTCCTCCCCCTACTCCCCCGCCAGGAGGACCCCACCACTCGTCAATATTGGTGGGGGAAGTAATGATCCTAAGGGCCCTTGTAATAATAATAAAGGGCCCTTCGAGTATATTAAGGATAGAGATGGTAGGGTACACATGATCAAAGTCGTCCCTGAGTTTATTGCAAAGATTATTACAAGTAATTTTGGTGGATCGAGCCCGAGTGGGGGTAATAAGCTCATTTGTAGTACTCCTGAATTGCAAAAGCAATATGAACAACTTGTTAGGGCTAAGGATCAAGCTTGGTCTCCTAAGCTCGAGACGATTTCGGAGCATAAGATTAGGTTTTCACCTTGTAGATTTATAGGGTTGGACTGGAAACAGAAGGAGAAGGCAAGTGCTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_98019.p1 GENE.R_Transcript_98019~~R_Transcript_98019.p1 ORF type:complete len:250 (+),score=31.85,DUF4228|PF14009.2|1.6e-25 R_Transcript_98019:215-964(+)
MGNTYAGAKLINDGAVSCFKFKGVPLLIIAKPTIKLILCEGSTRVLKHRRKIKAGEIMFQFPDCVICHADSFFLGRPIPILAIHDHLVAGNSYFILPLDRLPPTEGPGGGVLSAASLSSLGSSPYSPARRTPPLVNIGGGSNDPKGPCNNNKGPFEYIKDRDGRVHMIKVVPEFIAKIITSNFGGSSPSGGNKLICSTPELQKQYEQLVRAKDQAWSPKLETISEHKIRFSPCRFIGLDWKQKEKASAC*

Click here to download the sequence:
Link to NCBI Protein BLAST